Genomic Feature

tsu21cd

ID
ZDB-ALT-180327-3
Name
tsu21cd
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Meng Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 11: 11791297 - 11791319 (GRCz11) (1) Details
Nucleotide change
CACAGAGGAGCGCAGCGCTGCTT/AG
Variant Notes
The mutation is expected to produce a protein with deletion of seven residues  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted / 23 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
Amino Acid Deletion: 7 AA missing from position 97 to 103 (1)
Sequences
Flanking Sequence
ACCTTTTGTTCTTGGAGCACACAGTTCAGACAAGCCGTCTTGCCTGTGCCAGGAGCACCAGAGATGTAAAGGCTGGAGGGTTTTTCTGCCACTACGTGATTTTGCAGGAAGGAGACAATGGCAGCTCTCTCTGCCTCACGAGAGAGGAGACGTTCAGGTACTGCAGTGTGAAGAGCCTGCTTTACACTCTGAAAACCGGATTCTGCAGAGAAACCAAGACAGATCTTAATGATCGACTGCCAGAAATCAAGAATTATGACCAAAAATAAATGGATACTTTATTATTATCTAAACGAAACGCACTCTTTATAGGAAACAGTCGCGTAACAGGGCTCCTTCCCTCTGTACGGGGGATTATGTTGGTGCATGATGTCTCGTTCAGTCGTGTTGGCGATGGACGAGAAATGGGAGACAGAGGAACTTTGTGCGAGGACAGGATAGGACGGGGAGGTGAGGAGAGGACTGGTGTGTTCTCGTTGAAGGACAGCTTGCGAGGGGAG
CACAGAGGAGCGCAGCGCTGCTT/AG AGGGGGAGAGCCAAGCATGGAGGCTGGCAGGTTACAGCCATTCTCATCACCTGGAAAACAAAAACACTTTGTGAATAAAACATAATGCAAATGCAGAAAACAAAATGGCTGTTTAATGGAGATGATTAACACACCTGTGCGTTTGCGGGGGCTCAGAGGCAGCCTTTCAGACAAAGGGGAGTTTAACACCTTGTTCCTGGGAGATTGACAAACACCGAGTGAATTTCCCACAATTGCCTTTCTAGGGGACAAAGGGGTGGTCTTATCGTCCACTTTATTTTCGCAGGAGCTTTTAGGCCGAGACCCCAATCTGGAAGACTTCCTTCTAGGGAACTGTAGAGTTGGCTGATTCTGTGAGCGAGTGCTGGGCATTTTTATGTTTAAAACCAGGAAGCAAATCTGAAAAAGGACAGTGGTATTTTAGTCCAAATAAATAAATAAATAAATATACACACACAAATATTTCCTGAAAAAACTTTTGTAGCATTCAGTTTTTGATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations