Genomic Feature

sdu1

ID
ZDB-ALT-171030-1
Name
sdu1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
De-Li Shi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 27751855 - 27751864 (GRCz11) (1) Details
Nucleotide change
CCACGGAGTG/-
Variant Notes
The mutation produces a frameshift in the 5′ region of the coding sequence and  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTCTTTTAACAAATATTTTAATGTAAATAAATTTTAATGTAATGGAAAATATGCCATCTGAAGGAATCTCTGGCGCAGCTTCCAATCCCTGTCAATATTGTGCAAAGTGTAGTTACATTTTTCGAGAGGTGCGTGGGTATGTGACCGCACGAAGGTTGCGCCCGACCTTGTGCGTTCGATGCAGAAGTTTAAATCAGCCTTAACAGAGTGGGGTCACGTGACCCCATGTGCGGTAGGAAAAGTAATTGAAAAATTGACCTTGAAAAATTAGATGAATTATAGGTTCTAAATGTTGATTTCGATTACGTTTTGATTAATCGCCCAGCCTTATTATGCATTCTAATCATTTAATACTTATACATACCTTTTAGCATTCATTTAAATATACTCTTTTAAAACTTCAGTATGTGAAAATCTATTTATGTCTTTTTTGTATGTTTGTGTAGTTATGATTCAAAGGGCAGAGGCGGTGCTCTCGGTCCTGGGGGAGCTGCAGGAGG
CCACGGAGTG/- TGTGGGTCTTGATGCCCTCACTAAAGTTGCAGTTGAGGTGGAGCAGGCGCTGGCCCCTTTCCCACTTCCTACAGCACCCTGCTCTGAGATCTCCTCATGGCAGGGCATCGACGCAGTGGCTCACAGGCTGTACCCAGGAGATGCACCCACAGGTCTGCTGCCTCTGGTCTGCAAAGGAGAAGGAAACCTGTTGTTTGATGCAGCTAGCATGCTTTTGGTGGGCTCTACGAGTCTGAGTCTGGAGCTGCAAGTCAGGACCGTGGTGGAGATGCTGATTTGGAAGAGGTACTACCTGTGTGGAATGATCGATTCTAAAGTGATGCTGCAAGCTGCCAGATTTTCCCTGTGTGCCGAGGAATCTCAGGATATGCTCAATCTCCCCATTCAGGTGCTGGAGGCCATCTTCGATGCAGATGTCAAGGCCTCATGCTTTCACGGGTCATTTGCAAACATGTGGCATGTGTATGCACTGGCCTCTGTCCTGCAGTGCAACATTTATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations