Genomic Feature

ihb2017

ID
ZDB-ALT-170424-5
Name
ihb2017
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Xiao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 18276418 - 18276427 (GRCz11) (1) Details
Nucleotide change
TAGCCAGTGC/-
Variant Notes
exon3 deletion of TAGCCAGTGC
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AGGCAGGCGCAAGTCTCTGAAAACAGTCCACCAAATGGCATGGCTACTCAGAGTTTGAAATACAATCAAAATTATTTGGGGCAGCATTTGAAAAAGCAGAGGAAACCGAAGATGACACCATCAAATCCTAGGATGTCCAAGAAGAAAGTTGCTGAGATTGATGACAACCATTGTAGGATTCTTTTGGCCAAGAAGACACCCAATAAGAAAACCCCTCTCAAAGCCACCATTCAGAAAGCCATTTCACAACATAAAATGAGGTTCCAGCACAAAAGAAATCCTTTTCTTCCCCAGGCCCAGATAGACCTGAAAAAATACATTGCAGAGGCTCAACACGAGAACAGGCAGCTCTTATACTACAACACAAAGAAAGAGCACTTGGAAACATTCATTGGTTCTGGTAGGCAGAATGGCTTTCACGTTAAATATGAACATGGAGGTCATTCTTTACCACCACAAAATGGACACTTTTACAATCATACAAATGACCATCTAGGTGC
TAGCCAGTGC/- CCAAGGCATGAATGTGAACAAAAGGTTTCTCAGGTATCAAAAACCTACGATGTGCTAAATCCTGGTGCTAAACAACAACTTCTGCAAACCATGGCCAATGAACCCTTTAAAGACTTGCCACAAATCCCAGAGATGTACCATAAAGCCAATGGCTTTAATGGTCATCAACACTTGCACACAAATCAGAATGGATTTTACAAAGTGGAGAAGTCTGGAGGTGTTACGGTGTTGTCTGCATCCAGTGTACATTCAGAGAACGGAGACATGGTGTACGCTGGAGAACAGACTCCCACCAAGCACACGATCAACAGCTTTTTGGAGTCTCCAATGAGGTTTTTGGATACCCCAACCAGGAATCTCATCAACACCCCCTCCAAACAATCAATGGAGATCCCCTCCTGTGACTGCGTGGGTAAGTCAGATTGGCTATACCATAATTTGCAAATAATTTCCCAGCTTTTATAGTACAATTGGTCTATAATCCATGGCATGCTATGTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tet1ihb2017/ihb2017 (AB)Homozygous♀+/- ♂+/-2 figures with image from Wang et al., 20172 figures with image from Wang et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations