Genomic Feature

pd110

ID
ZDB-ALT-160129-1
Name
pd110
Synonyms
  • chc1 (1)
  • renamed signaling deficient epidermis 1 mutants (1)
  • sde1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Poss Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
Comment Citation
Chen et al (2015): temperature-sensitive mutant; non-synonymous mutation (T to  ... Chen et al., 2015
Genome Browser
Variants
Variant Type
Point Mutation
Variant Location
Chr 25: 31627313 (GRCz11) (1) Details
Nucleotide change
A/G
Variant Notes
Chen et al (2015): temperature-sensitive mutant; non-synonymous mutation (T to  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>C (1)
Transcript Consequence
Missense (1)
Protein Consequence
Amino Acid Substitution: Lys>Pro at position 46 (1)
Sequences
Flanking Sequence
TCTCTAAAGACAAACATATTTTCATGTTCCAAAAACACCCACATGAAAATACAGGACGGTAATAAAAGCTCTTTCTGAAAATCTTCCAGATTCGAAGCCCTGAGGGGTGTTGGGAGAAGTCCCACAAGTGGGAAAACACATAAATCTTCATTAAGGGTATTAAAATATAATTATCAGGTCAAATTTAGAGCCCACAGGGCTTTCGTTTTTAATTTTGGATGTACATATATCAATTGACATCATGACGTTGCCCTAAAATAATGCTTATCTATGCAGCTTTTTAAAACTTAAGATCACATCCCTTTCATTTCCACCACTATGAACTTATGTTGGCTCATTCATAATCTCATCATTATAATTCAGAGTCAACAGAATTGACTGATACTTCTCCATTTCACATTTAGTCAACAATTAAAAAGAAGGATTTTGAGTTTACCTGCAAATGACTGACGATACAAAAGGGCTCAGGTTTATGGACTCCGCATGTTGAGGTGGCCAAG
A/G GTTGTTGAGCTCTTCCGATAAGCAGATCTCCTGTGGCCGGATAACAGCTCCCTTCTGTGCAAACATCTCCCAGCTCAGGCACATCTGCCAGAGCCCAGGCCCCTAAAACTATGTCAGAGTAAAAAAAAAAAAAGAAAAAAAAGCCTTTTTATGTAGATCTGTATTAAAATTCTGTCATTATTTGCTAACTCTCGTGTTGCTTCAAACCTGTTTGAGTTTTTGGTAAGACTTTATTTTGATGGTCCCTATCACACATTTTGTTGACTAAAAGTTGCATTGAATGTAGTTTCAATGCAACTTTTAATTAACAAAATGTGCATTAGGGACCATCAAAATAAAGCCATTTACTTCTCATTTGAGTATTAGTAGACTGTCTGCTTAATATATGGTGATACTGCTACTTCCAGACTATTTATTATTTGCAAGTACACGTCAACTCACACTAACCCCAACCTACTTATAATCTATTGAGAATTAGTTGGCTTGTTGATGCAACTTAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations