Genomic Feature

stl215

ID
ZDB-ALT-150416-1
Name
stl215
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Monk Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 37448847 - 37448852 (GRCz11) (1) Details
Nucleotide change
TGGCAT/-
Variant Notes
Liebscher (2014): 6 bp in-frame deletion, which results in the removal of aa  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
6 bp deleted (1)
Transcript Consequence
Inframe Deletion (1)
Protein Consequence
Amino Acid Deletion: 2 AA missing from position 831 to 832 (1)
Sequences
Flanking Sequence
GTGTTAAATGCAGTATTGCACAAAATATGGATGTGTTAAAGTGTCAAGGTCTGTTAAAAAAATCACCTTTCAAAGTTTAAACTGAAGAGTTTTGACAGAAAGCGGTACATTTTAATTATAGTAAATAATCATTTGATCAAGTTTGACTTTCTCATCAATGGAATTTTAAAGCAGACATTTTTAATAAATGATTTGTCCACGCTAATTACAAAAGTTCTACAAAATATCTAACACATCTTAATGTATCTGTCTCTCCAGAAAGATCCGAATCCTCAGTGTGTGTTTTGGGATTTCAACCTCCAAAGTAAGAGAAAGAGAAATGATATATGTAGCATTAAAACAGTCCCATAGGGGGCTGTGCATGCAGGCTTTCAGTAATCATGTAATATCTATTGGTCTCCATTAGATTACTCAGGGGGCTGGAATAGCGATGGCTGCAAGGTCGGTTCAGACTCCAACAGCAACAGGACCGTCTGCTTGTGTAATCACCTCACACACTT
TGGCAT/- CCTAATGGTGAGATTTGTGGGATTGGCAGCAGAATGACCCAACAGCGGTTTCATGCGTTAAGTCAATATGCCAGGCTGAAGCAATGTCAGTGTGTGTCTTAAGCTATATGTCAACTATGTCTGAAACAGACAGGGTCAATACTTAGGGGCTTCGCTATAAAATAATGTAGAACTGAAGTTATCAAGACACTTATACATTATTTTGCTGGAAAAGTTGCACCGGGCCAAACTTCAATAATGGGAATAAACACGGGTTAGACATAAACATGGATAAGCTTTACTGTGTAGGCCTATAATATAAGTCACATTTGATCATTTACTTCAGAAATAATGTGAAATCGTCTCTATAATAGATCTACACTCACCGGGCACTTTATTAGGTTCACCTTACTAAGGTGCATCCTGTTTGGATCCCTTTTGCCTTCAGGACTGCCTTAATCCATCAAGATTTTGGTTCATATTGACATGAGAGCATGTCAATATGGTCATGGTCATGCAAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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