Genomic Feature

p5bnc

ID
ZDB-ALT-110211-2
Name
p5bnc
Synonyms
  • bugeye (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
ENU 
Lab of Origin
Mullins Laboratory
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 9
Variants
Variant Type
Point Mutation
Variant Location
Chr 9: 48477864 (GRCz11) (1) Details
Nucleotide change
C/T
Variant Notes
Nonsense mutation in lrp2a resulting in Q413X.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
C>T (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: Gln>Stop at position 413 (1)
Sequences
Flanking Sequence
GGATAAGTTGGGGGTTCATTCCGCTGTGGCCAGCACTCATGAATAAAGGAACTAAGCCGAAGGAAAATTATTGAATGACTGTATTACATGCTTTTACACCAGCATCACAGCTTTCAGACGGATATTCCTGCTGTTAGCCGTTATCTCACATGTCCATTAATCAGGCTTTTTGTAACCCATCACTCTGCCTGCATCGCACACCATCATGTTATTAAGCTCCTGAAATGTCTGCCTCCCAACCATTTGTTTGGCAGCATCTGGAAAATGAATAACTAACGCTGGCACCACTCAGCCAATCCTAAACTCTCTCACATTAATTACGCCTTATCAAAAGTGCGTTATATAATGTGTGTTTTCTGAAAACTGTCAAGCTGTATCCGTCATTAATTCGCTGTGTTTGGTCATGTTTAGCTGGCGTGCCCTCGCTTATATTCTCCAACGGCAGAGACCTGCTGATCGCTGATGTTCATGGACACGGCTCTCAAACACTGGTTCAGTCC
C/T AGAACAGAGGAGCCGCTGTTGGTGTGGATTTTCATTACCAGCTGCAAAGGGTCTTTTGGACGGACACAATCCAAAATAAGGTAAAATAGACGGCAGGATAACAAAAACAACAACAACAACAACAGTCTTTTCAAGTTGCATTGATTTTTTTTTAATAAAATAGCATTTTATGGAGGTAGATTAGTCTCAAGTAACATTTTTATTGCATTGTATGGAGCAGGAATAGTCTCAATAATAATTGATGCAAAATACACACATTTTTTCACTCTTTGTTATATTGCAGGCATTTGCTGAAATCATTTAAGTAAATTTTTTTCTTCATTAATGTACACATAGCACCCCATATTGACACACAAACACAGAATTGTTGATATTTTTGCAGATTTATAAAACAGAAATCTGAAATATCACATGGTCCTAAGCATTCCGACTCTTTACTGTTACACTCATATATTTAACTCAGGTGCTGTCCATTTCTTCTGATCATCCTTGAGAGGGTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
lrp2ap5bnc/p5bncHomozygous♀+/- ♂+/-text only from Veth et al., 2011text only from Veth et al., 2011
lrp2ap5bnc/p5bncHomozygous♀-/- ♂-/-2 figures with image from Kur et al., 2011text only from Kur et al., 2011
lrp2ap5bnc/+ (AB)Heterozygous♀+/- ♂+/-
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Supplemental Information
Genotyping protocol
None
Citations