Genomic Feature
utr2e1
- ID
- ZDB-ALT-050130-16
- Name
- utr2e1
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- ENU
- Lab of Origin
- Parichy Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 23: 25274561 (GRCz11) (1) Details
- Nucleotide change
- T/A
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>A at position 2043 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Tyr>Stop at position 681 (1)
- Flanking Sequence
-
CACTTTTTACAAAACTAAAAAGCAAGAAAATAACATACTAGAACCTTCTGTATTTATTTATTTATTTATTTATTTTTGTTGTTTTATTTTTTGTTTTGTTGAGTACCAATAATTCATAATAGAAATCCTAAAAGAACAAAAAACTCCTGATCCCAATCACAATGATTTTGACTGGTACAGTAGTGTATGTTCCCACTATGTACTGAAAAGTGTCGATTTATGTGTCTCCTCATCAGATGTACAGGCCCTGCGTTGAGAGACTGTGTTGATCCTGACAGAAATGTGAACAGGTTAGTGGCGCCCTCTTCTGGTTACTTTGAGAAATTACAAACGCTTTCATATGTGTTTTTCTTCAACAAGCATGTTTCTCTCAGCTCTCAGATTGCAGGTATAGCAGTTGCCGTGTTTGCTGGTATTACTGTGCTTCTGGCGCTGTTTGTGCTTGGTATGCTGTATCACAGAGGCTTGGCCATTCGCCGCAAAAGAGCACTGAGAAGATA
T/A CTAGAGAGTGGTGAGGTAGGTCAGATGGTCTACATAACTTATTCACAACTCAGATCCACCTTCCTGCAGTTTTGCTGCAACCCTAATCAAACACACTTGAACAAGCTAATTAGTGTCTTCAGGATTGCTAGAAAGTTACAGATAGATGACTTTGATCCAGGTTGGACCTAATCTCTGAAGGGGATCTCAAAAGTCTAAATAAAACTATATCTATATCGATATAAGGCTCTTTGTTCAACCTCTATGAAAGCAAAAAAGGGCTTAATGCAATTTTGATTTAATTAAATGGCTTTACAATGATTAACAAAACTAAAAACTAGTCATTAAGGGTGTTTTTACACTTGAAAGGTTTGGTTTGATTAGTGTAATTTAGTTACAGGGGGAAAGTTCACCCAATAATTTAAATTTATACCCTCAGGTGGTTTCAAACCTCAAACCTTTATCATTTTTTTCTTTCTTCTGTTTAACACAAATTTTTTTAAAGAAAACCTGTAAAACTG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| erbb3butr2e1/utr2e1 | Homozygous | ♀+/- ♂+/- | 2 figures  from Budi et al., 2008 | ||
| erbb3butr2e1/+ | Heterozygous | ♀+/- ♂+/- | Fig. 1 from Budi et al., 2008 | ||
| erbb3butr2e1 | Unknown | Unknown | Fig. for (utr2e1) from Phenotype Annotation (1994-2006) |
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Supplemental Information
- Genotyping protocol
- None
- Budi, E.H., Patterson, L.B., and Parichy, D.M. (2011) Post-embryonic nerve-associated precursors to adult pigment cells: genetic requirements and dynamics of morphogenesis and differentiation. PLoS Genetics. 7(5):e1002044
- Honjo, Y., Payne, L., and Eisen, J.S. (2011) Somatosensory mechanisms in zebrafish lacking dorsal root ganglia. Journal of anatomy. 218(3):271-276
- Budi, E.H., Patterson, L.B., and Parichy, D.M. (2008) Embryonic requirements for ErbB signaling in neural crest development and adult pigment pattern formation. Development (Cambridge, England). 135(15):2603-2614
- Quigley, I.K., Manuel, J.L., Roberts, R.A., Nuckels, R.J., Herrington, E.R., MacDonald, E.L., and Parichy, D.M. (2005) Evolutionary diversification of pigment pattern in Danio fishes: differential fms dependence and stripe loss in D. albolineatus. Development (Cambridge, England). 132(1):89-104
- Quigley, I.K., Turner, J.M., Nuckels, R.J., Manuel, J.L., Budi, E.H., MacDonald, E.L., and Parichy, D.M. (2004) Pigment pattern evolution by differential deployment of neural crest and post-embryonic melanophore lineages in Danio fishes. Development (Cambridge, England). 131(24):6053-6069
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