Transcript

zgc:158234-004

ID

ZDB-TSCRIPT-090929-17921

Name

zgc:158234-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

paxbp1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147816 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000147816.2|gene_biotype:protein_coding|ENSDARG00000062361.7 transcript_biotype:processed_transcript gene_symbol:paxbp1 cdna chromosome:GRCz11:10:24422231:24442358:1
GCTCCCGGAGCAAACGTGCTGAACAACCACGGAAACGGAT
TTCAGCCAGGTGCTGTCAAGGCCGTTAAAGAGAAGAAAAA
GAGGAAGGAGATCCGAGAGGAGCCGAAAGCAAGTCTGCTG
AGCTTCCAGGATGATGAAGATGAAGCAGAAGTTTTCCGTG
TTTCCCTGTTCAGTGGTTCAGCAGTCTGAAAGGACAGCAG
ACGCTCCCTCCACTGGAGAACTTCTGCAGATTCTTGAAGC
ACTTGTCCAGCAGCCTGTACCGCAGCTGTGTGGCAGGATC
AGATGTGGAGAAGAGGAATGTCAGGGAACACATAAAGGAG
GTGATTCGGCTTCTGGGACGCCTCAACGCTTTAGACCATG
TGATCACAGTCGCGTCTGAACATGGCATCAAGGATATAAA
GACTCTTCTTGAGAAAAAATGAAAGGCAAAGCAATGGGAC
CATGTAAATACTGTGAATAATGTACATTTTAGTTGTGGCT
GAAAGGGTTTTCCTTTGACACGTGGGTGGAATTTAGTGAT
CAGTAATTCCTGAAATCCAGTGAAACTGCCACTGATTTGG
GTTTGAAGTGTGTTAGGACAGTTTTACCCCCTTTCCTGAA
GAGACATCTCTGCTTTTTACTTCACTTTTTTTTTAAGAAC
TGGGTCTTAATGGATCTTTTTAAACTTTTCTCTTCAAGAA
AAGACCACTTTACAATTCGCACATTGGTTCTGGTTGCACT
AAAGCTGGATTTCTTTGAGAACAGGTTACATGCAGCATAT
TGTAAACAACGTTCAAAATATTATTTATG

OTTDART00000037512 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000037512|OTTDARG00000027649|ZDB-GENE-070112-2352 zgc:158234|no_translation CH211-69K21.1-004 LG_ AL929315.8 Danio rerio protein_coding NOVEL, 789 bp
GCTCCCGGAGCAAACGTGCTGAACAACCACGGAAACGGAT
TTCAGCCAGGTGCTGTCAAGGCCGTTAAAGAGAAGAAAAA
GAGGAAGGAGATCCGAGAGGAGCCGAAAGCAAGTCTGCTG
AGCTTCCAGGATGATGAAGATGAAGCAGAAGTTTTCCGTG
TTTCCCTGTTCAGTGGTTCAGCAGTCTGAAAGGACAGCAG
ACGCTCCCTCCACTGGAGAACTTCTGCAGATTCTTGAAGC
ACTTGTCCAGCAGCCTGTACCGCAGCTGTGTGGCAGGATC
AGATGTGGAGAAGAGGAATGTCAGGGAACACATAAAGGAG
GTGATTCGGCTTCTGGGACGCCTCAACGCTTTAGACCATG
TGATCACAGTCGCGTCTGAACATGGCATCAAGGATATAAA
GACTCTTCTTGAGAAAAAATGAAAGGCAAAGCAATGGGAC
CATGTAAATACTGTGAATAATGTACATTTTAGTTGTGGCT
GAAAGGGTTTTCCTTTGACACGTGGGTGGAATTTAGTGAT
CAGTAATTCCTGAAATCCAGTGAAACTGCCACTGATTTGG
GTTTGAAGTGTGTTAGGACAGTTTTACCCCCTTTCCTGAA
GAGACATCTCTGCTTTTTACTTCACTTTTTTTTTAAGAAC
TGGGTCTTAATGGATCTTTTTAAACTTTTCTCTTCAAGAA
AAGACCACTTTACAATTCGCACATTGGTTCTGGTTGCACT
AAAGCTGGATTTCTTTGAGAACAGGTTACATGCAGCATAT
TGTAAACAACGTTCAAAATATTATTTATG

Related Transcripts

Transcripts related to paxbp1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	paxbp1-205 (1) Ensembl	Ensembl	810 nt	Select Tool ZFIN BLAST
mRNA	paxbp1-202 (1) Ensembl	Ensembl	2,368 nt	Select Tool ZFIN BLAST
mRNA	paxbp1-204 (1) Ensembl	Ensembl	3,319 nt	Select Tool ZFIN BLAST
ncRNA	zgc:158234-003 (1) Ensembl	Ensembl	1,026 nt	Select Tool ZFIN BLAST
ncRNA	zgc:158234-004	Ensembl	789 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations