Transcript

zgc:158234-003

ID

ZDB-TSCRIPT-090929-17920

Name

zgc:158234-003 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

paxbp1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000145973 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000145973.2|gene_biotype:protein_coding|ENSDARG00000062361.7 transcript_biotype:retained_intron gene_symbol:paxbp1 cdna chromosome:GRCz11:10:24429129:24435726:1
GTTGATCAGTGTTTGCACTGAAACATTGCTAAAATGCTGA
GCAGGTAAGTGATTTGGAGGAGAGTTTCCATCTCATCTCT
GTAAAATTGAGCTGTTCGATGGTGTCAAAACTTAAAAAAA
TGGATTCTGATGACAACAGAAAGTGGAGGAAAAACCTTAA
ACACTGTGCATGGAATTGCATTTCTTACGTTTTAACTGAA
ATATGTGTACTTATGCATAAACCTTTAGTATGATGTTTTG
AGTAGGTCAATAAATCTCACATGTTGTCAGTGTTGTAACT
GGGCTGGTGAATTTAGCTTTACTGAAGGCTAATATCAGTT
CTTTCCTTTTCAGGTAAGGCTGTTATGGCCCCTAACCTGG
ACTCATTTGGCCGAGATCGTACTGCCTATCTGGAGCTCGC
AAAGCAAAGGAGGATAGCTGAAAGAGAAGCCAGACGAACT
CGTCGCAGACAAGCTCGTGAGCAGAACGACAAGAGAGCAG
AGCATAAGGAAGGACTGTCTAGTGACGATGAAGAGACGTC
CACTGACATTACCAGCTTCGACTCAGAGAGAGAGCGCATC
TTAAAAGAGTCAAAGAAGGTGTTTGAGGATGTGGTGGAGG
ATTTCCATTCTCTGGACAATATCAAATCTCACTTTGAGAC
CTGGAGAAAGCTGTATTACAGCTGCTACAGAGACGCCTAC
ATTGGATTGTGTCTGCCCAAACTCTTCAACCCTCTTATTC
GGCTGCAGCTTATCTCGTGGTCCCCACTGGAGGTGGAGTG
CTCCAACTTTGAGTACATGCTGTGGTTTGAGTCTCTGCTC
TTCTATGGCTGTGGGGAGCAAAGTGCTCTAAAGAAAGAGG
AAGACGTGGATAACAACCTGCTTCCTGCTATTGTAGAAAG
AGTGCTGCTTCCTAAACTAGCAGTGCTAACGGATCAGATC
TGGGATCCACTGTCCAACAGCCAGACATACAGACTGGTGG
CATTCATGAAGAGGCTAGTGAAAGACTATCCCACTGTCCT
GCACGGCGAAAACCGCAACACACAAG

OTTDART00000037511 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000037511|OTTDARG00000027649|ZDB-GENE-070112-2352 zgc:158234|no_translation CH211-69K21.1-003 LG_ AL929315.8 Danio rerio protein_coding NOVEL, 1026 bp
GTTGATCAGTGTTTGCACTGAAACATTGCTAAAATGCTGA
GCAGGTAAGTGATTTGGAGGAGAGTTTCCATCTCATCTCT
GTAAAATTGAGCTGTTCGATGGTGTCAAAACTTAAAAAAA
TGGATTCTGATGACAACAGAAAGTGGAGGAAAAACCTTAA
ACACTGTGCATGGAATTGCATTTCTTACGTTTTAACTGAA
ATATGTGTACTTATGCATAAACCTTTAGTATGATGTTTTG
AGTAGGTCAATAAATCTCACATGTTGTCAGTGTTGTAACT
GGGCTGGTGAATTTAGCTTTACTGAAGGCTAATATCAGTT
CTTTCCTTTTCAGGTAAGGCTGTTATGGCCCCTAACCTGG
ACTCATTTGGCCGAGATCGTACTGCCTATCTGGAGCTCGC
AAAGCAAAGGAGGATAGCTGAAAGAGAAGCCAGACGAACT
CGTCGCAGACAAGCTCGTGAGCAGAACGACAAGAGAGCAG
AGCATAAGGAAGGACTGTCTAGTGACGATGAAGAGACGTC
CACTGACATTACCAGCTTCGACTCAGAGAGAGAGCGCATC
TTAAAAGAGTCAAAGAAGGTGTTTGAGGATGTGGTGGAGG
ATTTCCATTCTCTGGACAATATCAAATCTCACTTTGAGAC
CTGGAGAAAGCTGTATTACAGCTGCTACAGAGACGCCTAC
ATTGGATTGTGTCTGCCCAAACTCTTCAACCCTCTTATTC
GGCTGCAGCTTATCTCGTGGTCCCCACTGGAGGTGGAGTG
CTCCAACTTTGAGTACATGCTGTGGTTTGAGTCTCTGCTC
TTCTATGGCTGTGGGGAGCAAAGTGCTCTAAAGAAAGAGG
AAGACGTGGATAACAACCTGCTTCCTGCTATTGTAGAAAG
AGTGCTGCTTCCTAAACTAGCAGTGCTAACGGATCAGATC
TGGGATCCACTGTCCAACAGCCAGACATACAGACTGGTGG
CATTCATGAAGAGGCTAGTGAAAGACTATCCCACTGTCCT
GCACGGCGAAAACCGCAACACACAAG

Related Transcripts

Transcripts related to paxbp1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	paxbp1-205 (1) Ensembl	Ensembl	810 nt	Select Tool ZFIN BLAST
mRNA	paxbp1-202 (1) Ensembl	Ensembl	2,368 nt	Select Tool ZFIN BLAST
mRNA	paxbp1-204 (1) Ensembl	Ensembl	3,319 nt	Select Tool ZFIN BLAST
ncRNA	zgc:158234-003	Ensembl	1,026 nt
ncRNA	zgc:158234-004 (1) Ensembl	Ensembl	789 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations