ZFIN ID: ZDB-GENE-990415-17
Gene Name: atonal bHLH transcription factor 1a
Gene Symbol: atoh1a
Sequence Ontology ID : SO:0000704

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Previous Names: ath1, Atoh1.1 (1), atoh1, ZATH-1 (1), zath1 (1), Zath1a (1), zgc:136417

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits chromatin binding activity; involved in several processes, including auditory receptor cell fate determination, auditory receptor cell fate determination, and neuron differentiation;  ...
GENE EXPRESSION
All Expression Data: 87 figures from 58 publications
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
atoh1a_unrecovered Point Mutation Unknown Unknown ENU
fh282 Point Mutation Unknown Unknown ENU
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 6 figures from 4 publications
    Observed in:
    DISEASE ASSOCIATED WITH atoh1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atoh1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process inner ear auditory receptor cell differentiation (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011598 (1)
  • InterPro:IPR032661 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atoh1a-201 (1) 1630
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atoh1a
    MARKER RELATIONSHIPS
    atoh1aContained in: [BAC] CH211-247L22 (1) (order this)
    atoh1aEncodes: [cDNA] MGC:136417 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131091 (1) 906bp
    Genomic GenBank:AL807792 (1) 160553bp
    Select Tool
    Polypeptide UniProtKB:B0R059 (1) 292aa
    Sequence Clusters UniGene:566 (1)
    Sequence Information (all 15)
    OTHER atoh1a GENE PAGES
  • Alliance (1)
  • Gene:30303 (1)
  • VEGA:OTTDARG00000020311 (1)
  • Ensembl(GRCz11):ENSDARG00000055294 (2)
  • ORTHOLOGY for atoh1a (Chr: 8)
    CITATIONS (123)