ZFIN ID: ZDB-GENE-980526-423
Gene Name: forkhead box A3
Gene Symbol: foxa3
Sequence Ontology ID : SO:0000704

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Previous Names: fa11c04, fc37a08, fkd2 (1), forkhead-2, wu:fa11c04, wu:fc37a08, zf-FKH1, Zffkh1

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 157 figures from 131 publications
Wild-type Stages, Structures: Blastula:1k-cell (3.0h-3.33h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb162 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • ihb163 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • la013319Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 6 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH foxa3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH foxa3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axial mesoderm morphogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 14)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001766 (1)
  • InterPro:IPR013638 (1)
  • InterPro:IPR018122 (1)
  • InterPro:IPR018533 (1)
  • InterPro:IPR030456 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00657 (1)
  • PROSITE:PS00658 (1)
  • PROSITE:PS50039 (1)
  • Pfam:PF00250 (1)
  • Pfam:PF08430 (1)
  • Pfam:PF09354 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxa3-001 (1) 2763
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM foxa3 No data available
    MARKER RELATIONSHIPS
    foxa3Contained in: [BAC] DKEY-223N17 (1) (order this)
    foxa3Encodes: [EST] fa11c04, fc37a08
    [cDNA] MGC:194053 (1) (order this), MGC:194065 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131299 (1) 2524bp
    Genomic GenBank:BX908751 (1) 157961bp
    Select Tool
    Polypeptide UniProtKB:B3DGF9 (1) 441aa
    Sequence Clusters UniGene:1307 (1)
    Sequence Information (all 25)
    OTHER foxa3 GENE PAGES
  • Alliance (1)
  • Gene:30559 (1)
  • VEGA:OTTDARG00000013633 (1)
  • Ensembl(GRCz11):ENSDARG00000012788 (2)
  • ORTHOLOGY for foxa3 (Chr: 18)
    CITATIONS (221)