Gene

sptbn5

ID
ZDB-GENE-131121-26
Name
spectrin, beta, non-erythrocytic 5
Symbol
sptbn5 Nomenclature History
Previous Names
  • si:dkey-28g23.4
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have actin binding activity and phospholipid binding activity. Involved in glial cell development and retina development in camera-type eye. Orthologous to human SPTBN5 (spectrin beta, non-erythrocytic 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Charlton-Perkins et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sptbn5 Human Ortholog
No data available
Associated With sptbn5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR001589 Actinin-type actin-binding domain, conserved site
Domain IPR001605 Pleckstrin homology domain, spectrin-type
Domain IPR001715 Calponin homology domain
Domain IPR001849 Pleckstrin homology domain
Homologous_superfamily IPR011993 PH-like domain superfamily
Homologous_superfamily IPR036872 CH domain superfamily
Repeat IPR002017 Spectrin repeat
Repeat IPR018159 Spectrin/alpha-actinin
Domain Details Per Protein
Protein Length Actinin-type actin-binding domain, conserved site Calponin homology domain CH domain superfamily PH-like domain superfamily Pleckstrin homology domain Pleckstrin homology domain, spectrin-type Spectrin/alpha-actinin Spectrin repeat
UniProtKB:A0A8M9P0M0 3884
UniProtKB:A0A8M9PLG4 3910
UniProtKB:A0A8M9PEW4 4138
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA sptbn5-201 (1) Havana 13082 nt
mRNA sptbn5-202 (1) Ensembl 12423 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations