ZFIN is now using GRCz12tu for Genomic Data
Gene
ccl25b
- ID
- ZDB-GENE-110222-2
- Name
- chemokine (C-C motif) ligand 25b
- Symbol
- ccl25b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables chemokine activity. Acts upstream of or within several processes, including lymphoid lineage cell migration into thymus; regulation of hematopoietic stem cell migration; and regulation of hematopoietic stem cell proliferation. Predicted to be located in extracellular space. Is expressed in several structures, including blood vessel; head; hematopoietic system; immune system; and spinal cord. Orthologous to human CCL25 (C-C motif chemokine ligand 25).
- Genome Resources
- Note
-
I-Na Lu et al. (120807-5) suggest orthology to CCL21 based on AA similarity and CL with human Chr 9.
- Comparative Information
-
- All Expression Data
- 11 figures from 9 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Xue et al., 2017
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Chemokine beta/gamma/delta | Chemokine interleukin-8-like domain | Chemokine interleukin-8-like superfamily |
|---|---|---|---|---|---|
| UniProtKB:F1QBE9 | InterPro | 106 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ccl25b-201
(1)
|
Ensembl | 806 nt | ||
| mRNA |
ccl25b-203
(1)
|
Ensembl | 3,370 nt | ||
| ncRNA |
ccl25b-002
(1)
|
Ensembl | 883 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers