Gene

clip2

ID

ZDB-GENE-100727-3

Name

CAP-GLY domain containing linker protein 2

Symbol

clip2 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Orthologous to human CLIP2 (CAP-Gly domain containing linker protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With clip2 Human Ortholog

No data available

Associated With clip2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000938	CAP Gly-rich domain
Homologous_superfamily	IPR036859	CAP Gly-rich domain superfamily

Domain Details Per Protein

Protein	Length	CAP Gly-rich domain	CAP Gly-rich domain superfamily
UniProtKB:A0A8M3B003 InterPro	1023
UniProtKB:A0A8M9Q4W2 InterPro	1041
UniProtKB:A0A8M2BJA6 InterPro	1006

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	clip2-203 (1) Ensembl	Ensembl		830 nt	Select Tool
mRNA	clip2-201 (1) Ensembl	Ensembl		3,948 nt	Select Tool ZFIN BLAST
mRNA	clip2-202 (1) Ensembl	Ensembl		3,843 nt	Select Tool
mRNA	clip2-204 (1) Ensembl	Ensembl		624 nt	Select Tool
mRNA	clip2-205 (1) Ensembl	Ensembl		3,747 nt	Select Tool ZFIN BLAST
mRNA	clip2-206 (1) Ensembl	Ensembl		4,032 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations