Gene

havcr2

ID
ZDB-GENE-091204-20
Name
hepatitis A virus cellular receptor 2
Symbol
havcr2 Nomenclature History
Previous Names
  • DrTIM-3 (1)
  • kim1 (1)
  • si:dkey-222k23.2 (1)
  • tim3 (1)
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in renal cell carcinoma. Orthologous to human HAVCR2 (hepatitis A virus cellular receptor 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Yin et al., 2016
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With havcr2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
T-cell lymphoma, subcutaneous panniculitis-like 618398
Associated With havcr2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003599 Immunoglobulin subtype
Domain IPR007110 Immunoglobulin-like domain
Domain IPR013106 Immunoglobulin V-set domain
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR036179 Immunoglobulin-like domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin-like domain Immunoglobulin-like domain superfamily Immunoglobulin-like fold Immunoglobulin subtype Immunoglobulin V-set domain
UniProtKB:A0A8M3ALN7 208
UniProtKB:E7FEV9 231
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA havcr2-202 (1) Havana 801 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-havcr2
  • IHC
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations