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ZIRC
ZFIN ID: ZDB-GENE-081104-438
Gene Name: interferon induced with helicase C domain 1
Gene Symbol: ifih1
Sequence Ontology ID : SO:0001217

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Previous Names: mda5 (1), si:dkey-81j5.2

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits protein heterodimerization activity. Involved in regulation of transcription, DNA-templated. Human ortholog(s) of this gene implicated in Aicardi-Goutieres syndrome. Orthologous to human  ...
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Days 21-29 (21d-30d, 7.8mm, 10 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
mk29 Small Deletion Unknown Unknown CRISPR
sa13902 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ifih1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Aicardi-Goutieres syndrome Aicardi-Goutieres syndrome 7 615846
    Singleton-Merten syndrome 1 182250
    DISEASE ASSOCIATED WITH ifih1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Molecular Function protein heterodimerization activity (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ifih1-202 (1) 2153
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ifih1
    MARKER RELATIONSHIPS
    ifih1 Contained in: [BAC] DKEY-81J5 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001308563 (1)
    Genomic GenBank:AL954669 (1) 133954 bp
    Select Tool
    Polypeptide UniProtKB:A0A0E3D804 (1) 997 aa
    Sequence Information (all 14)
    ORTHOLOGY for ifih1 ( Chr: 9 )
    CITATIONS (31)