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General Information
ZIRC
ZFIN ID: ZDB-GENE-080215-1
Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Gene Symbol: smarcd2
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in hematopoietic progenitor cell differentiation and neutrophil differentiation. Predicted to localize to the SWI/SNF complex. Orthologous to human SMARCD2 (SWI/SNF related, matrix  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
gl35 Insertion Unknown Frameshift CRISPR
sa13736 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45453 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Witzel et al., 2017
    Observed in:
    DISEASE ASSOCIATED WITH smarcd2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Specific granule deficiency 2 617475
    DISEASE ASSOCIATED WITH smarcd2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process hematopoietic progenitor cell differentiation (more)
    Cellular Component SWI/SNF complex (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smarcd2-201 (1) 3116
    aberrant processed transcript smarcd2-202 (1) 724
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smarcd2 No data available
    MARKER RELATIONSHIPS
    smarcd2Contained in: [BAC] CH73-103L1 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_687657 (1) 3195bp
    Genomic GenBank:CU459020 (1) 114759bp
    Select Tool
    Polypeptide UniProtKB:E7EYW7 (1) 501aa
    Sequence Clusters UniGene:152024 (1)
    Sequence Information (all 11)
    ORTHOLOGY for smarcd2 (Chr: 12)
    CITATIONS (17)