ZFIN is now using GRCz12tu for Genomic Data
Gene
loxl5b
- ID
- ZDB-GENE-070818-3
- Name
- lysyl oxidase-like 5b
- Symbol
- loxl5b Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein-lysine 6-oxidase activity. Acts upstream of or within notochord morphogenesis. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix and extracellular space. Is expressed in notochord and prechordal plate.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Gansner et al., 2007
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Lysyl oxidase | Lysyl oxidase, conserved site | Lysyl oxidase-like protein |
|---|---|---|---|---|---|
| UniProtKB:A6MH35 | InterPro | 444 | |||
| UniProtKB:F1QGY9 | InterPro | 445 | |||
| UniProtKB:A0A8M6Z7N5 | InterPro | 400 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
loxl5b-201
(1)
|
Ensembl | 1,911 nt | ||
| mRNA |
loxl5b-202
(1)
|
Ensembl | 4,675 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers