loxl5b

ID

ZDB-GENE-070818-3

Name

lysyl oxidase-like 5b

Symbol

loxl5b Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable protein-lysine 6-oxidase activity. Predicted to be involved in collagen fibril organization and platelet-derived growth factor receptor-beta signaling pathway. Predicted to be active in extracellular matrix. Is expressed in notochord and prechordal plate.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Gansner et al., 2007
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With loxl5b Human Ortholog

No data available

Associated With loxl5b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR019828	Lysyl oxidase, conserved site
Family	IPR001695	Lysyl oxidase

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A6MH35	InterPro	444
UniProtKB:F1QGY9	InterPro	445
UniProtKB:A0A8M6Z7N5	InterPro	400
UniProtKB:A0ACD6B667	InterPro	564
UniProtKB:A0AC58G9F9	InterPro	506
UniProtKB:A0AC58G9G9	InterPro	506
UniProtKB:A0AC58G9H5	InterPro	506
UniProtKB:A0AC58G9I9	InterPro	510
UniProtKB:A0AC58G9J0	InterPro	400
UniProtKB:A0AC58G9J6	InterPro	510
UniProtKB:A0AC58G9K4	InterPro	400
UniProtKB:A0AC58G9L6	InterPro	400
UniProtKB:A0AC58G9M6	InterPro	400
UniProtKB:A0AC58G9S0	InterPro	203