Gene
rad21l1
- ID
- ZDB-GENE-061103-505
- Name
- RAD21 cohesin complex component like 1
- Symbol
- rad21l1 Nomenclature History
- Previous Names
-
- zgc:154013
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Description
- Predicted to enable chromatin binding activity. Predicted to be involved in replication-born double-strand break repair via sister chromatid exchange and sister chromatid cohesion. Predicted to act upstream of or within chromosome segregation. Predicted to be located in chromosome and nucleus. Predicted to be part of cohesin complex. Orthologous to human RAD21L1 (RAD21 cohesin complex component like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR006909 | Rad21/Rec8-like protein, C-terminal, eukaryotic |
| Domain | IPR006910 | Rad21/Rec8-like protein, N-terminal |
| Domain | IPR049589 | NXP-1, middle HEAT-repeat binding domain |
| Family | IPR039781 | Rad21/Rec8-like protein |
| Homologous_superfamily | IPR036390 | Winged helix DNA-binding domain superfamily |
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Domain Details Per Protein
| Protein | Additional Resources | Length | NXP-1, middle HEAT-repeat binding domain | Rad21/Rec8-like protein | Rad21/Rec8-like protein, C-terminal, eukaryotic | Rad21/Rec8-like protein, N-terminal | Winged helix DNA-binding domain superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0JMM5 | InterPro | 546 |
1 - 1 of 1
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rad21l1-201
(1)
|
Ensembl | 2,179 nt | ||
| ncRNA |
rad21l1-002
(1)
|
Ensembl | 564 nt |
1 - 2 of 2
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-rad21l1 | polyclonal | Mouse |
|
1 |
1 - 1 of 1
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | Fosmid | CH1073-428E6 | ZFIN Curated Data | |
| Encodes | cDNA | MGC:154013 | ZFIN Curated Data |
1 - 2 of 2
Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001080050 (1) | 2209 nt | ||
| Genomic | GenBank:CU467960 (2) | 35067 nt | ||
| Polypeptide | UniProtKB:A0JMM5 (1) | 546 aa |