ZFIN is now using GRCz12tu for Genomic Data
Gene
ctdspla
- ID
- ZDB-GENE-060825-333
- Name
- CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a
- Symbol
- ctdspla Nomenclature History
- Previous Names
-
- wu:fj98d02
- zgc:153196
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Orthologous to human CTDSPL (CTD small phosphatase like).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR004274 | FCP1 homology domain |
| Domain | IPR011948 | Dullard phosphatase domain, eukaryotic |
| Family | IPR040078 | CTD small RNA polymerase II polypeptide A phosphatase-like |
| Family | IPR050365 | Mitochondrial import inner membrane translocase subunit TIM50 |
| Homologous_superfamily | IPR023214 | HAD superfamily |
| Homologous_superfamily | IPR036412 | HAD-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | CTD small RNA polymerase II polypeptide A phosphatase-like | Dullard phosphatase domain, eukaryotic | FCP1 homology domain | HAD-like superfamily | HAD superfamily | Mitochondrial import inner membrane translocase subunit TIM50 |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q0P4B2 | InterPro | 220 | ||||||
| UniProtKB:A0A0R4IC10 | InterPro | 276 | ||||||
| UniProtKB:A0A8M1NAQ0 | InterPro | 265 | ||||||
| UniProtKB:A0AB32TD10 | InterPro | 303 | ||||||
| UniProtKB:A0AB32TIR9 | InterPro | 292 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ctdspla-201
(1)
|
Ensembl | 1,914 nt | ||
| mRNA |
ctdspla-206
(1)
|
Ensembl | 831 nt | ||
| ncRNA |
ctdspla-002
(1)
|
Ensembl | 1,551 nt | ||
| ncRNA |
ctdspla-003
(1)
|
Ensembl | 792 nt | ||
| ncRNA |
ctdspla-004
(1)
|
Ensembl | 461 nt | ||
| ncRNA |
ctdspla-005
(1)
|
Ensembl | 369 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers