Transcript

ctdspla-003

ID

ZDB-TSCRIPT-090929-19509

Name

ctdspla-003 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ctdspla (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000132626 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000132626.2|gene_biotype:protein_coding|ENSDARG00000071673.6 transcript_biotype:retained_intron cdna chromosome:GRCz11:24:20450615:20470991:-1
GGGTTGCAGCTACTAAACAACTAAGAAGATCAGAAGAGGT
TTGTTCTCTGACTGGATTCAGAAGTGATTGGTTTTCTGTT
GTAACTGTTGTTTGTTTGGTTTGTTTGAGGATGTACACTG
TATGTGCTGAAAAGGCCTCATGTGGATGAGCTTCTGTTTG
TTTTTCTGTCAGTAATTGTTTGTTTGGTTTGTTTGAAGGT
GTATGTGCTGAAAAGGCCTCATGTGGACGAGTTTCTGCAG
AAAATGGGCGAAATGTTTGAATGTGTTCTTTTTACAGCCA
GCCTGGCTAAGTACGCTGACCCTGTAGCAGACCTGCTGGA
CCAGTGGGGGGTGTTCAGGGCTCGGCTCTTCAGGGAATCC
TGTGTGTTTCACCGGGGAAACTACGTCAAAGACCTCAGCC
GACTGGGCCGAGAGCTCAACAAGGTCATCATCGTGGACAA
CTCACCTGCCTCCTACATCTTCCACCCAGAGAACGCTGTG
CCAGTTCAGTCGTGGTTTGATGACATGACAGACACAGAGC
TCCTGGATTTACTGCCACTGTTTGAAGGCCTAAGCCGAGA
GACTGACGTTTACAGTGTGTTACAGAGCCTGAGGGACAGG
TAGCACACGGGCTCAACACTGCCTCCAAAACACCACCCTC
CATCCATCATCCATCCATCCGTCCGTCCGTTCAGTTCTGG
CCTTCAGAGGATGCCATTCATCCAACCAACTACTCCAGAT
CCTCAATGGACCAAGGGCCTACAATAATCCTTGGCAAGCA
AATACACATCTGAGTTCACCTTTTGACGCACA

OTTDART00000039206 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000039206|OTTDARG00000028692|ZDB-GENE-060825-333 ctdspla|no_translation DKEY-246L21.1-003 LG_none CR388015.14,BX571770.6 Danio rerio protein_coding NOVEL, 792 bp
GGGTTGCAGCTACTAAACAACTAAGAAGATCAGAAGAGGT
TTGTTCTCTGACTGGATTCAGAAGTGATTGGTTTTCTGTT
GTAACTGTTGTTTGTTTGGTTTGTTTGAGGATGTACACTG
TATGTGCTGAAAAGGCCTCATGTGGATGAGCTTCTGTTTG
TTTTTCTGTCAGTAATTGTTTGTTTGGTTTGTTTGAAGGT
GTATGTGCTGAAAAGGCCTCATGTGGACGAGTTTCTGCAG
AAAATGGGCGAAATGTTTGAATGTGTTCTTTTTACAGCCA
GCCTGGCTAAGTACGCTGACCCTGTAGCAGACCTGCTGGA
CCAGTGGGGGGTGTTCAGGGCTCGGCTCTTCAGGGAATCC
TGTGTGTTTCACCGGGGAAACTACGTCAAAGACCTCAGCC
GACTGGGCCGAGAGCTCAACAAGGTCATCATCGTGGACAA
CTCACCTGCCTCCTACATCTTCCACCCAGAGAACGCTGTG
CCAGTTCAGTCGTGGTTTGATGACATGACAGACACAGAGC
TCCTGGATTTACTGCCACTGTTTGAAGGCCTAAGCCGAGA
GACTGACGTTTACAGTGTGTTACAGAGCCTGAGGGACAGG
TAGCACACGGGCTCAACACTGCCTCCAAAACACCACCCTC
CATCCATCATCCATCCATCCGTCCGTCCGTTCAGTTCTGG
CCTTCAGAGGATGCCATTCATCCAACCAACTACTCCAGAT
CCTCAATGGACCAAGGGCCTACAATAATCCTTGGCAAGCA
AATACACATCTGAGTTCACCTTTTGACGCACA

Related Transcripts

Transcripts related to ctdspla

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ctdspla-201 (1) Ensembl	Ensembl	1,914 nt	Select Tool ZFIN BLAST
mRNA	ctdspla-206 (1) Ensembl	Ensembl	831 nt	Select Tool ZFIN BLAST
ncRNA	ctdspla-002 (1) Ensembl	Ensembl	1,551 nt	Select Tool ZFIN BLAST
ncRNA	ctdspla-003	Ensembl	792 nt
ncRNA	ctdspla-004 (1) Ensembl	Ensembl	461 nt	Select Tool ZFIN BLAST
ncRNA	ctdspla-005 (1) Ensembl	Ensembl	369 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations