Gene

si:ch211-147a11.3

ID
ZDB-GENE-060503-102
Name
si:ch211-147a11.3
Symbol
si:ch211-147a11.3 Nomenclature History
Previous Names
  • zgc:158389
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to be located in nucleus. Orthologous to human C1orf174 (chromosome 1 open reading frame 174).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With si:ch211-147a11.3 Human Ortholog
No data available
Associated With si:ch211-147a11.3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR031530 UPF0688 family
1 - 1 of 1
Domain Details Per Protein
Protein Additional Resources Length UPF0688 family
UniProtKB:Q1L9C9 InterPro 188
UniProtKB:Q1L9C7 InterPro 189
1 - 2 of 2
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch211-147a11.3-201 (1)
Ensembl
Ensembl 918 nt
ZFIN BLAST
mRNA si:ch211-147a11.3-202 (1)
Ensembl
Ensembl 1,848 nt
ZFIN BLAST
mRNA si:ch211-147a11.3-206 (1)
Ensembl
Ensembl 835 nt
ZFIN BLAST
ncRNA si:ch211-147a11.3-003 (1)
Ensembl
Ensembl 656 nt
ZFIN BLAST
ncRNA si:ch211-147a11.3-005 (1)
Ensembl
Ensembl 905 nt
ZFIN BLAST
1 - 5 of 6 Show all
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-147A11ZFIN Curated Data
EncodescDNAMGC:158389ZFIN Curated Data
EncodescDNAMGC:165405ZFIN Curated Data
1 - 3 of 3
Show
Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001044837 (1)835 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR352301 (1)176256 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:Q1L9C7 (1)189 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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