Gene

frg1

ID

ZDB-GENE-050417-324

Name

FSHD region gene 1

Symbol

frg1 Nomenclature History

Previous Names

zgc:112426

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have actin filament binding activity. Predicted to localize to catalytic step 2 spliceosome; nucleolus; and striated muscle dense body. Orthologous to human FRG1 (FSHD region gene 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:112426 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With frg1 Human Ortholog

No data available

Associated With frg1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR010414	Protein FRG1
Homologous_superfamily	IPR008999	Actin-crosslinking

Domain Details Per Protein

Protein	Length	Actin-crosslinking	Protein FRG1
UniProtKB:Q566W5 InterPro	255

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	frg1-204 (1) Ensembl	Ensembl	816 nt	Select Tool ZFIN BLAST
mRNA	frg1-201 (1) Ensembl	Ensembl	1,154 nt	Select Tool ZFIN BLAST
mRNA	frg1-203 (1) Ensembl	Ensembl	426 nt	Select Tool ZFIN BLAST
mRNA	frg1-205 (1) Ensembl	Ensembl	2,707 nt	Select Tool ZFIN BLAST
ncRNA	frg1-004 (1) Ensembl	Ensembl	881 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations