Transcript

frg1-204

ID

ZDB-TSCRIPT-141209-2676

Name

frg1-204 Nomenclature History

Previous Names

frg1-005
dkeyp-88c1.2-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

frg1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000162729 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000162729.2|gene_biotype:protein_coding|ENSDARG00000056504.6 transcript_biotype:nonsense_mediated_decay gene_symbol:frg1 cdna chromosome:GRCz11:1:16675290:16685821:-1
CTGGACTCTTCACTGTAGGATCTCCACATAAAGAGGATGA
AGGTCCAGATCCTCCTGAACAGTTCACAGCTATAAAACTC
TCAGATTCCAGGATAGCACTGAAGTCAGGGTATGGGAAGT
ATTTGGGTATAAACTCAGAGGGAGTTGTTGTTGGCCGATC
AGATGCCATAGGCTCCAGAGAGCAGTGGGAACCAGTGTTT
CAAAATGGTAAAATGGCCTTGCTTGCTGCAAACAGTTGTT
TCATCTCGTACAGTGAGAGCGGAGACATCGTGGCCAAAAA
CAAGACAGCTGGAGAGGAGGAAATGATCAAGATCCGTTCA
TGCACAGAAAGGGAGGTGAAGAGGAAAGATGATATTGCAG
ATGAAGACCGAGGCGATGTCAAGAACTGCGAGCTCAATTA
TGTAAGTTCCAGAGTTTTCAGGACCGGAAGCTGAGGCTGA
ATGAGGAAGACAGCGGTTCACTCAAAAAAGCCAGAACAGA
TGGAAAGTTCCATGAGGCACTGCTGGACAGGAGGTCAAAG
ATGAAGGCTGACAGATACTGCAAGTGAAACCAGAAGAAGC
ACATCATCATTTTTACATCTTCATGGAATTGACATTTTAA
TTTCACAATTTTAACTTTATTCTTGCAAATGCAAGTTACA
AACTCAAGCAATTCTGGCTGTTTTCTTCATATTTGTCAGA
TACAGACTTCTCAAGCCCAAAATTATTCATACACCTGGTC
AATTTTGACTTAGTTACTTAAAGAAATATTTGTACTTAAA
GAAATGTATTTTTTTTTCCATGATGGAAATGAATGATGCC
TCTTGTACATCGTATT

OTTDART00000046502 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000046502|OTTDARG00000033135|ZDB-GENE-050417-324 frg1|OTTDARP00000036664 DKEYP-88C1.2-005 LG_ CU570993.9 Danio rerio protein_coding KNOWN, 816 bp
CTGGACTCTTCACTGTAGGATCTCCACATAAAGAGGATGA
AGGTCCAGATCCTCCTGAACAGTTCACAGCTATAAAACTC
TCAGATTCCAGGATAGCACTGAAGTCAGGGTATGGGAAGT
ATTTGGGTATAAACTCAGAGGGAGTTGTTGTTGGCCGATC
AGATGCCATAGGCTCCAGAGAGCAGTGGGAACCAGTGTTT
CAAAATGGTAAAATGGCCTTGCTTGCTGCAAACAGTTGTT
TCATCTCGTACAGTGAGAGCGGAGACATCGTGGCCAAAAA
CAAGACAGCTGGAGAGGAGGAAATGATCAAGATCCGTTCA
TGCACAGAAAGGGAGGTGAAGAGGAAAGATGATATTGCAG
ATGAAGACCGAGGCGATGTCAAGAACTGCGAGCTCAATTA
TGTAAGTTCCAGAGTTTTCAGGACCGGAAGCTGAGGCTGA
ATGAGGAAGACAGCGGTTCACTCAAAAAAGCCAGAACAGA
TGGAAAGTTCCATGAGGCACTGCTGGACAGGAGGTCAAAG
ATGAAGGCTGACAGATACTGCAAGTGAAACCAGAAGAAGC
ACATCATCATTTTTACATCTTCATGGAATTGACATTTTAA
TTTCACAATTTTAACTTTATTCTTGCAAATGCAAGTTACA
AACTCAAGCAATTCTGGCTGTTTTCTTCATATTTGTCAGA
TACAGACTTCTCAAGCCCAAAATTATTCATACACCTGGTC
AATTTTGACTTAGTTACTTAAAGAAATATTTGTACTTAAA
GAAATGTATTTTTTTTTCCATGATGGAAATGAATGATGCC
TCTTGTACATCGTATT

Related Transcripts

Transcripts related to frg1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	frg1-204	Ensembl	816 nt
mRNA	frg1-201 (1) Ensembl	Ensembl	1,154 nt	Select Tool
mRNA	frg1-203 (1) Ensembl	Ensembl	426 nt	Select Tool
mRNA	frg1-205 (1) Ensembl	Ensembl	2,707 nt	Select Tool ZFIN BLAST
ncRNA	frg1-004 (1) Ensembl	Ensembl	881 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations