ZFIN ID: ZDB-GENE-050417-278
Gene Name: mitochondrial ribosomal protein S18B
Gene Symbol: mrps18b    Nomenclature History

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Previous Names: wu:fj45h02, zgc:112517

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to localize to the mitochondrion. Is expressed in heart. Orthologous to human MRPS18B (mitochondrial ribosomal protein S18B).
Genome Resources: Alliance (1),  Gene:550455 (1),  Ensembl(GRCz11):ENSDARG00000007065 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6893089]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
xu0425Gt Transgenic Insertion Intron 2 Unknown DNA
DISEASE ASSOCIATED WITH mrps18b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH mrps18b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mitochondrial translation (more)
Cellular Component ribosome (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR001648 Ribosomal protein S18
Homologous_superfamily IPR036870 Ribosomal protein S18 superfamily
Family IPR040054 28S ribosomal protein S18b, mitochondrial
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA mrps18b-201 (1)    Ensembl 1124
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM mrps18b No data available
MARKER RELATIONSHIPS
mrps18b Contained in: [BAC] CH211-215A10 (1)
mrps18b Encodes: [EST] fj45h02, IMAGE:6893089 (1)
[cDNA] MGC:112517 (1), MGC:173670 (1), MGC:192269 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001017759 (1) 1151 bp
Genomic GenBank:BX510301 (1) 209585 bp Blast at MegaBLAST
Polypeptide UniProtKB:A7MCC7 (1) 242 aa
Sequence Information (all 21)
ORTHOLOGY for mrps18b ( Chr: 19 )
CITATIONS (25)