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General Information
ZIRC
ZFIN ID: ZDB-GENE-050417-272
Gene Name: zinc finger, HIT-type containing 1
Gene Symbol: znhit1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:112524

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have histone deacetylase binding activity and nucleosome binding activity; predicted to be involved in histone exchange and regulation of histone deacetylation; predicted to localize to  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14774 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH znhit1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH znhit1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin remodeling (more)
    Cellular Component Swr1 complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007529 (1)
  • InterPro:IPR039723 (1)
  • PROSITE:PS51083 (1)
  • Pfam:PF04438 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA znhit1-201 (1) 1009
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM znhit1 No data available
    MARKER RELATIONSHIPS
    znhit1Contained in: [BAC] CH211-271E10 (1) (order this)
    znhit1Encodes: [cDNA] MGC:112524 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017401 (1) 1023bp
    Genomic GenBank:BX640523 (1) 107704bp
    Select Tool
    Polypeptide UniProtKB:Q561S5 (1) 154aa
    Sequence Clusters UniGene:16573 (1)
    Sequence Information (all 12)
    ORTHOLOGY for znhit1 (Chr: 5)
    CITATIONS (19)