ZFIN ID: ZDB-GENE-050417-272
Gene Name: zinc finger, HIT-type containing 1
Gene Symbol: znhit1    Nomenclature History

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Previous Name: zgc:112524

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have histone deacetylase binding activity and nucleosome binding activity. Predicted to be involved in histone exchange and regulation of histone deacetylation. Predicted to localize to the Swr1 complex. Is expressed in liver. Orthologous to human ZNHIT1 (zinc finger HIT-type containing 1).
Genome Resources: Alliance (1),  Gene:407699 (1),  Ensembl(GRCz11):ENSDARG00000054574 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14774 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH znhit1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH znhit1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin remodeling (more)
    Cellular Component Swr1 complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR007529 Zinc finger, HIT-type
    Family IPR039723 Vps71/ZNHIT1
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA znhit1-201 (1)    Ensembl 1009
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM znhit1 No data available
    MARKER RELATIONSHIPS
    znhit1 Contained in: [BAC] CH211-271E10 (1)
    znhit1 Encodes: [cDNA] MGC:112524 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017401 (1) 1023 bp
    Genomic GenBank:BX640523 (1) 107704 bp
    Select Tool
    Polypeptide UniProtKB:Q561S5 (1) 154 aa
    Sequence Clusters UniGene:16573 (1)
    Sequence Information (all 12)
    ORTHOLOGY for znhit1 ( Chr: 5 )
    CITATIONS (20)