Gene
vps9d1
- ID
- ZDB-GENE-050306-57
- Name
- VPS9 domain containing 1
- Symbol
- vps9d1 Nomenclature History
- Previous Names
-
- c18h16orf7 (1)
- id:ibd5127
- wu:fa56d01
- zgc:113159
- zgc:158780
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Description
- Predicted to enable guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be active in cytosol and endocytic vesicle. Is expressed in brain; forebrain; and neural rod. Orthologous to human VPS9D1 (VPS9 domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7152365 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Vacuolar protein sorting-associated protein 9-like | VPS9 domain | VPS9 domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:A5WVN9 | InterPro | 502 | |||
| UniProtKB:A0A8M9P121 | InterPro | 638 | |||
| UniProtKB:A0A8M9PA19 | InterPro | 455 | |||
| UniProtKB:A0A8M2BH61 | InterPro | 685 | |||
| UniProtKB:A0A8M1N4I8 | InterPro | 659 | |||
| UniProtKB:A1L2C2 | InterPro | 598 | |||
| UniProtKB:A0A8M2BHA3 | InterPro | 476 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
vps9d1-201
(1)
|
Ensembl | 2,995 nt | ||
| mRNA |
vps9d1-203
(1)
|
Ensembl | 989 nt | ||
| mRNA |
vps9d1-206
(1)
|
Ensembl | 2,172 nt | ||
| ncRNA |
vps9d1-003
(1)
|
Ensembl | 760 nt | ||
| ncRNA |
vps9d1-005
(1)
|
Ensembl | 715 nt | ||
| ncRNA |
vps9d1-006
(1)
|
Ensembl | 359 nt | ||
| ncRNA |
vps9d1-007
(1)
|
Ensembl | 595 nt |
Interactions and Pathways
No data available
Plasmids
No data available