Transcript

vps9d1-003

ID

ZDB-TSCRIPT-090929-12684

Name

vps9d1-003 Nomenclature History

Previous Names

zgc:113159-003

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

vps9d1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000144603 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000144603.2|gene_biotype:protein_coding|ENSDARG00000019195.12 transcript_biotype:processed_transcript gene_symbol:vps9d1 cdna chromosome:GRCz11:18:14642871:14649295:1
ACATTAAGAGGTCTGCATGTGTGTGTGTATGACAGGGAAT
TAACGCCTATTGAAGAAGCGTCACGTCTAAACCAGAAACT
TAAGGCTAATTACGAAGCAAGGCTGGCAAGACTAACCCCT
GGTCAGGCCACTCAAAAAACCTCCCTGACTCTCTCACTCC
AGAGGCAGATGATGGAGAACCTGATAATAGCTAAAGCCAG
ACAAGATGCTCTTCAAAGAAAAATGGAGGAGAGGAGACTC
CGGCTGCAGGAAGAAGCTAACAGAAGGTTTGCCACCTGTG
GAACAATGACACCCGAGGAACAAGAGCAGCGAGTTCTGTA
TGCAAGTGTGCTTGAATATGAACAGGATCATGAGTGGCCA
AAAATTTGGAAAGCCAAGCTTAAAAAGTCTCCAAATGATC
CTGCACTGGTTTCCGGTCTTATCGCCTGCCTTCTCAGCTA
TCCAGATCACCCAGTCATGAAGTTGCTGAAGAGGCTTCAG
TATCGGGTATATAACAGACTGTATCCTATAGTGAGCCAGT
GCTCTCCTCTAAACACAACATCTGGTCACTCTCTATCCTT
AAAGCCTTCCCGAAGTGCCCATAGCCTCCTCCTCTCAGAC
TGTCCCATCTCTCCACATCATCAGCAGAGCCCCTTCAAAT
CAGCCCTGACACACAGCTTATCGGATGCCTCCATCTCCCT
TTCCCCATCCCGTGATCTCAACGCCAACGACACCAAGTCT
GAGGCCGACCCTGACGATTCCTCAAGTCTCCTCACCACGG

OTTDART00000030486 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000030486|OTTDARG00000023411|ZDB-GENE-050306-57 vps9d1|no_translation DKEY-238O13.5-003 LG_ CT025859.8 Danio rerio protein_coding KNOWN, 760 bp
ACATTAAGAGGTCTGCATGTGTGTGTGTATGACAGGGAAT
TAACGCCTATTGAAGAAGCGTCACGTCTAAACCAGAAACT
TAAGGCTAATTACGAAGCAAGGCTGGCAAGACTAACCCCT
GGTCAGGCCACTCAAAAAACCTCCCTGACTCTCTCACTCC
AGAGGCAGATGATGGAGAACCTGATAATAGCTAAAGCCAG
ACAAGATGCTCTTCAAAGAAAAATGGAGGAGAGGAGACTC
CGGCTGCAGGAAGAAGCTAACAGAAGGTTTGCCACCTGTG
GAACAATGACACCCGAGGAACAAGAGCAGCGAGTTCTGTA
TGCAAGTGTGCTTGAATATGAACAGGATCATGAGTGGCCA
AAAATTTGGAAAGCCAAGCTTAAAAAGTCTCCAAATGATC
CTGCACTGGTTTCCGGTCTTATCGCCTGCCTTCTCAGCTA
TCCAGATCACCCAGTCATGAAGTTGCTGAAGAGGCTTCAG
TATCGGGTATATAACAGACTGTATCCTATAGTGAGCCAGT
GCTCTCCTCTAAACACAACATCTGGTCACTCTCTATCCTT
AAAGCCTTCCCGAAGTGCCCATAGCCTCCTCCTCTCAGAC
TGTCCCATCTCTCCACATCATCAGCAGAGCCCCTTCAAAT
CAGCCCTGACACACAGCTTATCGGATGCCTCCATCTCCCT
TTCCCCATCCCGTGATCTCAACGCCAACGACACCAAGTCT
GAGGCCGACCCTGACGATTCCTCAAGTCTCCTCACCACGG

Related Transcripts

Transcripts related to vps9d1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vps9d1-201 (1) Ensembl	Ensembl	2,995 nt	Select Tool ZFIN BLAST
mRNA	vps9d1-203 (1) Ensembl	Ensembl	989 nt	Select Tool ZFIN BLAST
mRNA	vps9d1-206 (1) Ensembl	Ensembl	2,172 nt	Select Tool ZFIN BLAST
ncRNA	vps9d1-003	Ensembl	760 nt
ncRNA	vps9d1-005 (1) Ensembl	Ensembl	715 nt	Select Tool ZFIN BLAST
ncRNA	vps9d1-006 (1) Ensembl	Ensembl	359 nt	Select Tool ZFIN BLAST
ncRNA	vps9d1-007 (1) Ensembl	Ensembl	595 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations