Gene

hmgn3

ID
ZDB-GENE-041114-180
Name
high mobility group nucleosomal binding domain 3
Symbol
hmgn3 Nomenclature History
Previous Names
  • fa04b03
  • TRIP7 (1)
  • wu:fa04b03
  • zgc:92355
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to enable chromatin binding activity. Predicted to be involved in chromatin organization. Predicted to act upstream of or within positive regulation of transcription by RNA polymerase II and regulation of insulin secretion involved in cellular response to glucose stimulus. Predicted to be located in chromatin. Predicted to be active in nucleus. Is expressed in central nervous system; lens; mucus secreting cell; and otic placode. Orthologous to human HMGN3 (high mobility group nucleosomal binding domain 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2008
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-hmgn3N/AHuang et al., 2013
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Human Disease
Associated With hmgn3 Human Ortholog
No data available
Associated With hmgn3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR000079 High mobility group protein HMGN
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Domain Details Per Protein
1 - 4 of 4
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 23
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hmgn3-201 (1) Ensembl 1,124 nt
mRNA hmgn3-202 (1) Ensembl 1,183 nt
mRNA hmgn3-203 (1) Ensembl 360 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-241O6ZFIN Curated Data
EncodesESTfa04b03
EncodescDNAMGC:92355ZFIN Curated Data
EncodescDNAMGC:173764ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanHMGN36
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseHmgn39
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
1 - 5 of 5
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