Gene

utp3

ID

ZDB-GENE-040912-163

Name

UTP3 small subunit processome component

Symbol

utp3 Nomenclature History

Previous Names

sas10 (1)
zgc:92127 (1)

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to nucleolus and small-subunit processome. Is expressed in several structures, including brain; digestive system; and endoderm. Orthologous to human UTP3 (UTP3 small subunit processome component).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:92127 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 5 figures from Zhao et al., 2019
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With utp3 Human Ortholog

No data available

Associated With utp3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR018972	Sas10 C-terminal domain
Family	IPR007146	Sas10/Utp3/C1D

Domain Details Per Protein

Protein	Length	Sas10 C-terminal domain	Sas10/Utp3/C1D
UniProtKB:Q66I02 InterPro	470

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	utp3-201 (1) Ensembl	Ensembl		1,972 nt	Select Tool ZFIN BLAST
ncRNA	utp3-002 (1) Ensembl	Ensembl		723 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations