Gene
pdxdc1
- ID
- ZDB-GENE-040912-16
- Name
- pyridoxal-dependent decarboxylase domain containing 1
- Symbol
- pdxdc1 Nomenclature History
- Previous Names
-
- wu:fj29c10
- zgc:92179 (1)
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Predicted to have sphinganine-1-phosphate aldolase activity. Predicted to be involved in ameboidal-type cell migration and sphingolipid catabolic process. Predicted to localize to endoplasmic reticulum. Is expressed in EVL; notochord; periderm; pharynx; and polster. Orthologous to human PDXDC1 (pyridoxal dependent decarboxylase domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7160098 (15 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Group II Amino Acid Decarboxylases | Pyridoxal phosphate-dependent decarboxylase | Pyridoxal phosphate-dependent transferase | Pyridoxal phosphate-dependent transferase, major domain |
|---|---|---|---|---|---|
|
UniProtKB:Q66HY8
|
751 | ||||
|
UniProtKB:A0A0R4IQA6
|
766 | ||||
|
UniProtKB:A0A8M3AQS9
|
767 | ||||
|
UniProtKB:A0A2R8QBE4
|
782 | ||||
|
UniProtKB:A0A8M3AY69
|
774 | ||||
|
UniProtKB:A0A8M3AR25
|
781 | ||||
|
UniProtKB:A0A8M3B151
|
775 | ||||
|
UniProtKB:A0A8M9PGM2
|
416 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pdxdc1-201
(1)
|
Ensembl | 3,864 nt | ||
| mRNA |
pdxdc1-203
(1)
|
Ensembl | 2,349 nt | ||
| ncRNA |
pdxdc1-002
(1)
|
Ensembl | 495 nt |
Interactions and Pathways
No data available
Plasmids
No data available