ZFIN is now using GRCz12tu for Genomic Data
Gene
nid2b
- ID
- ZDB-GENE-040724-143
- Name
- nidogen 2b (osteonidogen)
- Symbol
- nid2b Nomenclature History
- Previous Names
-
- si:ch211-13n20.2
- si:dkey-29m11.1
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable calcium ion binding activity. Predicted to be involved in cell-matrix adhesion; epithelial cell differentiation; and system development. Predicted to be located in basement membrane. Is expressed in head. Orthologous to human NID2 (nidogen 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
| Domain | IPR000716 | Thyroglobulin type-1 |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR001881 | EGF-like calcium-binding domain |
| Domain | IPR003886 | NIDO domain |
| Domain | IPR006605 | G2 nidogen/fibulin G2F |
| Domain | IPR024731 | NELL2-like, EGF domain |
| Domain | IPR049883 | NOTCH1, EGF-like calcium-binding domain |
| Homologous_superfamily | IPR009017 | Green fluorescent protein |
| Homologous_superfamily | IPR009030 | Growth factor receptor cysteine-rich domain superfamily |
| Homologous_superfamily | IPR011042 | Six-bladed beta-propeller, TolB-like |
| Homologous_superfamily | IPR036857 | Thyroglobulin type-1 superfamily |
| PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
| Repeat | IPR000033 | LDLR class B repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | G2 nidogen/fibulin G2F | Green fluorescent protein | Growth factor receptor cysteine-rich domain superfamily | LDLR class B repeat | NELL2-like, EGF domain | NIDO domain | NOTCH1, EGF-like calcium-binding domain | Six-bladed beta-propeller, TolB-like | Thyroglobulin type-1 | Thyroglobulin type-1 superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PD71 | InterPro | 454 | ||||||||||||||
| UniProtKB:A0A8M9PT02 | InterPro | 1166 | ||||||||||||||
| UniProtKB:A0AC58I7D4 | InterPro | 1163 | ||||||||||||||
| UniProtKB:A0AC58I7F1 | InterPro | 1105 | ||||||||||||||
| UniProtKB:A0AC58I7F3 | InterPro | 1105 | ||||||||||||||
| UniProtKB:A0AC58I7F8 | InterPro | 1157 | ||||||||||||||
| UniProtKB:A0AC58I7I1 | InterPro | 1157 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers