ZFIN is now using GRCz12tu for Genomic Data
Gene

ncor1

ID
ZDB-GENE-040426-993
Name
nuclear receptor corepressor 1
Symbol
ncor1 Nomenclature History
Previous Names
  • NCOR (1)
  • zgc:56355
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable nuclear thyroid hormone receptor binding activity and transcription corepressor activity. Acts upstream of or within anterior/posterior pattern specification; hindbrain development; and neutrophil differentiation. Predicted to be located in nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in chromatin. Is expressed in several structures, including epidermis; head; liver; pleuroperitoneal region; and ventricular system. Orthologous to human NCOR1 (nuclear receptor corepressor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
15 figures from 8 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ncor1 Human Ortholog
No data available
Associated With ncor1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001005 SANT/Myb domain
Domain IPR017884 SANT domain
Domain IPR017930 Myb domain
Domain IPR031557 N-CoR, GPS2-interacting domain
Family IPR051571 Nuclear receptor corepressor
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Additional Resources Length Homedomain-like superfamily Myb domain N-CoR, GPS2-interacting domain Nuclear receptor corepressor SANT domain SANT/Myb domain
UniProtKB:A0A8M3AZS8 InterPro 1948
UniProtKB:A0A8M3B9S7 InterPro 2388
UniProtKB:A0A8M3ASM4 InterPro 1953
UniProtKB:A0A8M9Q2Z1 InterPro 1954
UniProtKB:A0A8M3B2M9 InterPro 2438
UniProtKB:A0A8M2BCM0 InterPro 2411
UniProtKB:A0A8M3ASH4 InterPro 2436
UniProtKB:A0A8M3AZS6 InterPro 2437
UniProtKB:A8B6H7 InterPro 2409
UniProtKB:A0A8M3B2N4 InterPro 1949
UniProtKB:A0AC58JHU6 InterPro 2437
UniProtKB:A0AC58JHU7 InterPro 2437
UniProtKB:A0AC58JHV0 InterPro 2435
UniProtKB:A0AC58JHV1 InterPro 2411
UniProtKB:A0AC58JHV2 InterPro 2435
UniProtKB:A0AC58JHV3 InterPro 2436
UniProtKB:A0AC58JHV4 InterPro 2410
UniProtKB:A0AC58JHV5 InterPro 2410
UniProtKB:A0AC58JHV6 InterPro 2408
UniProtKB:A0AC58JHV7 InterPro 2408
UniProtKB:A0AC58JHV8 InterPro 2407
UniProtKB:A0AC58JHV9 InterPro 2386
UniProtKB:A0AC58JHW0 InterPro 2434
UniProtKB:A0AC58JHW2 InterPro 2385
UniProtKB:A0AC58JHW3 InterPro 2387
UniProtKB:A0AC58JHW5 InterPro 2361
UniProtKB:A0AC58JHW6 InterPro 2385
UniProtKB:A0AC58JHW7 InterPro 2360
UniProtKB:A0AC58JHW9 InterPro 1945
UniProtKB:A0AC58JHX0 InterPro 2359
UniProtKB:A0AC58JHX1 InterPro 2388
UniProtKB:A0AC58JHX2 InterPro 2358
UniProtKB:A0AC58JHX4 InterPro 2358
UniProtKB:A0AC58JHX5 InterPro 1952
UniProtKB:A0AC58JHX6 InterPro 1946
UniProtKB:A0AC58JHX7 InterPro 1946
UniProtKB:A0AC58JHX8 InterPro 1927
UniProtKB:A0AC58JHX9 InterPro 2360
UniProtKB:A0AC58JHY0 InterPro 1925
UniProtKB:A0AC58JHY1 InterPro 1897
UniProtKB:A0AC58JHY2 InterPro 1924
UniProtKB:A0AC58JHY3 InterPro 1918
UniProtKB:A0AC58JHY5 InterPro 1926
UniProtKB:A0AC58JHY6 InterPro 1947
UniProtKB:A0AC58JHY7 InterPro 1919
UniProtKB:A0AC58JHY8 InterPro 1920
UniProtKB:A0AC58JHY9 InterPro 1919
UniProtKB:A0AC58JHZ0 InterPro 1902
UniProtKB:A0AC58JHZ1 InterPro 1921
UniProtKB:A0AC58JHZ2 InterPro 1899
UniProtKB:A0AC58JHZ4 InterPro 1875
UniProtKB:A0AC58JHZ7 InterPro 1874
UniProtKB:A0AC58JHZ8 InterPro 1872
UniProtKB:A0AC58JHZ9 InterPro 1922
UniProtKB:A0AC58JI01 InterPro 1904
UniProtKB:A0AC58JI15 InterPro 1870
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ncor1-201 (1) Ensembl 7,571 nt
mRNA ncor1-202 (1) Ensembl 8,232 nt
mRNA ncor1-203 (1) Ensembl 810 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations