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ZIRC
ZFIN ID: ZDB-GENE-040426-914
Gene Name: heme binding protein 2
Gene Symbol: hebp2    Nomenclature History

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Previous Names: soul1 (1), zgc:56136

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have heme binding activity. Predicted to localize to the cytoplasm. Is expressed in several structures, including extension; hypophysis; neuromast; peripheral olfactory organ; and yolk syncytial layer. Orthologous to human HEBP2 (heme binding protein 2).
Genome Resources: Alliance (1),  Gene:393167 (1),  Ensembl(GRCz11):ENSDARG00000042630 (2)
GENE EXPRESSION
All Expression Data: 5 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56136]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hebp2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hebp2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cytoplasm (more)
Molecular Function heme binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006917 (1)
  • InterPro:IPR011256 (1)
  • Pfam:PF04832 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hebp2-201 (1)    Ensembl 1682
    hebp2-202 (1)    Ensembl 777
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hebp2 No data available
    MARKER RELATIONSHIPS
    hebp2 Contained in: [BAC] CH211-195E3 (1) (order this)
    hebp2 Encodes: [cDNA] MGC:56136 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200198 (1) 1490 bp
    Genomic GenBank:AL929182 (1) 225515 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5SPA1 (1) 190 aa
    Sequence Clusters UniGene:18410 (1)
    Sequence Information (all 14)
    ORTHOLOGY for hebp2 ( Chr: 20 )
    CITATIONS (23)