Gene

ca15b

ID

ZDB-GENE-040426-2222

Name

carbonic anhydrase XVb

Symbol

ca15b Nomenclature History

Previous Names

zCA15b (1)
fd15c07
wu:fd15c07
wu:fi24f01
zgc:65797 (1)
zgc:77106

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have carbonate dehydratase activity and zinc ion binding activity. Involved in germ cell migration and regulation of intracellular pH. Predicted to localize to integral component of membrane. Is expressed in several structures, including blastomere; germ line cell; heart; margin; and ovary.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

11 figures from 5 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:77106 (9 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Tarbashevich et al., 2015
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ca15b Human Ortholog

No data available

Associated With ca15b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR018338	Carbonic anhydrase, alpha-class, conserved site
Domain	IPR001148	Alpha carbonic anhydrase domain
Family	IPR023561	Carbonic anhydrase, alpha-class
Family	IPR041874	Carbonic anhydrase, CA4/CA15
Homologous_superfamily	IPR036398	Alpha carbonic anhydrase domain superfamily

Domain Details Per Protein

Protein	Length	Alpha carbonic anhydrase domain	Alpha carbonic anhydrase domain superfamily	Carbonic anhydrase, alpha-class	Carbonic anhydrase, alpha-class, conserved site	Carbonic anhydrase, CA4/CA15
UniProtKB:Q7SZR2 InterPro	305
UniProtKB:A0A8M2BGQ8 InterPro	221
UniProtKB:R4GDY8 InterPro	320

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ca15b-201 (1) Ensembl	Ensembl	507 nt	Select Tool
aberrant processed transcript	ca15b-204 (1) Ensembl	Ensembl	614 nt	Select Tool
mRNA	ca15b-202 (1) Ensembl	Ensembl	660 nt	Select Tool
mRNA	ca15b-203 (1) Ensembl	Ensembl	1,686 nt	Select Tool
ncRNA	ca15b-004 (1) Ensembl	Ensembl	630 nt	Select Tool
ncRNA	ca15b-006 (1) Ensembl	Ensembl	766 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-ca15b	polyclonal	ca15b		Rabbit	IHC WB		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations