header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1314
Gene Name: reticulon 4 interacting protein 1
Gene Symbol: rtn4ip1
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:63964

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have oxidoreductase activity. Involved in eye photoreceptor cell development and retina layer formation. Predicted to localize to the mitochondrial outer membrane. Human ortholog(s) of  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63964]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH rtn4ip1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
optic atrophy 10 Optic atrophy 10 with or without ataxia, mental retardation, and seizures 616732
DISEASE ASSOCIATED WITH rtn4ip1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process eye photoreceptor cell development (more)
Cellular Component mitochondrial outer membrane (more)
Molecular Function oxidoreductase activity (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA rtn4ip1-201 (1) 1370
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM rtn4ip1 No data available
MARKER RELATIONSHIPS
rtn4ip1 Contained in: [BAC] CH73-374A13 (1) (order this), CH211-135B6 (1) (order this), DKEY-234C9 (1) (order this)
rtn4ip1 Encodes: [cDNA] MGC:63964 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200352 (1) 1412 bp
Genomic GenBank:AL772189 183958 bp
Select Tool
Polypeptide UniProtKB:F1QZY9 (1) 387 aa
Sequence Clusters UniGene:16642 (1)
Sequence Information (all 13)
ORTHOLOGY for rtn4ip1 ( Chr: 17 )
CITATIONS (21)