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ZIRC
ZFIN ID: ZDB-GENE-031001-8
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Symbol: ddx27    Nomenclature History

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Previous Name: cb843 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have RNA binding activity and RNA helicase activity. Predicted to be involved in rRNA processing. Predicted to localize to the nucleolus. Is expressed in several structures, including alar plate midbrain region; brain; digestive system; musculature system; and retina. Orthologous to human DDX27 (DEAD-box helicase 27).
Genome Resources: Alliance (1),  Gene:378844 (1),  Ensembl(GRCz11):ENSDARG00000091831 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1086aTg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la015973Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la025703Tg Transgenic Insertion Unknown Unknown DNA
    la029264Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33984 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zf3030 Small Deletion Unknown Unknown ENU
    PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH ddx27 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ddx27 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleolus (more)
    Molecular Function ATP binding (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ddx27-201 (1)    Ensembl 2626
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ddx27 No data available
    MARKER RELATIONSHIPS
    ddx27 Contained in: [BAC] CH211-60J9 (1) (order this)
    [Fosmid] ZFOS-1537B9 (1)
    ddx27 Encodes: [EST] cb843 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002869 (1) 2630 bp
    Genomic GenBank:CU929339 (1) 181638 bp
    Select Tool
    Polypeptide UniProtKB:F1QPH6 (1) 776 aa
    Sequence Clusters UniGene:76523 (1)
    Sequence Information (all 11)
    ORTHOLOGY for ddx27 ( Chr: 6 )
    CITATIONS (29)