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General Information
ZIRC
ZFIN ID: ZDB-GENE-030605-1
Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a
Gene Symbol: smarca4a
Sequence Ontology ID : SO:0000704

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Previous Names: brg1 (2), smarca2, smarca4, brahma-related gene 1 (1), wu:fb51a08, yng, young

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity; DNA-dependent ATPase activity; and transcription factor binding activity. Involved in several processes, including animal organ development; fin regeneration;  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a8 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • a50 Point Mutation Unknown Unknown ENU
    s481 Point Mutation Unknown Premature Stop ENU
    sa12514 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19981 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH smarca4a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Coffin-Siris syndrome 4 Coffin-Siris syndrome 4 614609
    {Rhabdoid tumor predisposition syndrome 2} 613325
    DISEASE ASSOCIATED WITH smarca4a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process activation of MAPKKK activity (more)
    Cellular Component nucleus (more)
    Molecular Function ATPase activity (more)
    GO Terms (all 28)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smarca4a-201 (1) 5680
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smarca4a
    MARKER RELATIONSHIPS
    smarca4aContained in: [BAC] CH211-224D23 (1) (order this)
    smarca4aContains: [SNP] rs3727693 (1)
    smarca4aEncodes: [EST] ay205256 (2) (order this), fb51a08, IMAGE:5611934 (1) (order this), IMAGE:6909706 (1) (order this), IMAGE:7138284 (1) (order this)
    [cDNA] MGC:77219 (1) (order this), MGC:195345 (1) (order this), MGC:195348 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_181603 (1) 4884bp
    Genomic GenBank:BX322663 (1) 145520bp
    Select Tool
    Polypeptide UniProtKB:Q7ZSY3 (1) 1627aa
    Sequence Clusters UniGene:2414 (1)
    Sequence Information (all 34)
    ORTHOLOGY for smarca4a (Chr: 3)
    CITATIONS (46)