Community Action Needed: Please respond to the NIH RFI
Gene

npas2

ID
ZDB-GENE-030408-3
Name
neuronal PAS domain protein 2
Symbol
npas2 Nomenclature History
Previous Names
  • clock2
  • zfCLOCK2 (1)
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Contributes to double-stranded DNA binding activity. Acts upstream of or within circadian rhythm and photoperiodism. Part of transcription regulator complex. Orthologous to several human genes including NPAS2 (neuronal PAS domain protein 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With npas2 Human Ortholog
No data available
Associated With npas2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000014 PAS domain
Domain IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Domain IPR013767 PAS fold
Family IPR001067 Nuclear translocator
Homologous_superfamily IPR035965 PAS domain superfamily
Homologous_superfamily IPR036638 Helix-loop-helix DNA-binding domain superfamily
Repeat IPR001610 PAC motif
Domain Details Per Protein
Protein Length Helix-loop-helix DNA-binding domain superfamily Myc-type, basic helix-loop-helix (bHLH) domain Nuclear translocator PAC motif PAS domain PAS domain superfamily PAS fold
UniProtKB:Q8JIG3 845
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations