Gene
lmo7a
- ID
- ZDB-GENE-030219-74
- Name
- LIM domain 7a
- Symbol
- lmo7a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to enable cysteine-type deubiquitinase activity and metal ion binding activity. Predicted to act upstream of or within regulation of cell adhesion and regulation of signaling. Is expressed in several structures, including brain; digestive system; eye; immature eye; and pericardial region. Orthologous to human LMO7 (LIM domain 7).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001478 | PDZ domain |
Domain | IPR001715 | Calponin homology domain |
Domain | IPR001781 | Zinc finger, LIM-type |
Domain | IPR031865 | Domain of unknown function DUF4757 |
Domain | IPR041489 | PDZ domain 6 |
Family | IPR003096 | Smooth muscle protein/calponin |
Family | IPR029978 | LIM domain only protein 7 |
Homologous_superfamily | IPR036034 | PDZ superfamily |
Homologous_superfamily | IPR036872 | CH domain superfamily |
Domain Details Per Protein
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
aberrant processed transcript |
lmo7a-203
(1)
|
Ensembl | 625 nt | ||
mRNA |
lmo7a-201
(1)
|
Ensembl | 6,323 nt | ||
mRNA |
lmo7a-202
(1)
|
Ensembl | 812 nt | ||
mRNA |
lmo7a-204
(1)
|
Ensembl | 1,052 nt | ||
mRNA |
lmo7a-210
(1)
|
Ensembl | 663 nt | ||
mRNA |
lmo7a-212
(1)
|
Ensembl | 754 nt | ||
ncRNA |
lmo7a-008
(1)
|
Ensembl | 853 nt | (2 sequences) | |
ncRNA |
lmo7a-206
(1)
|
Ensembl | 824 nt | ||
ncRNA |
lmo7a-207
(1)
|
Ensembl | 733 nt | ||
ncRNA |
lmo7a-208
(1)
|
Ensembl | 895 nt | ||
ncRNA |
lmo7a-209
(1)
|
Ensembl | 853 nt | ||
ncRNA |
lmo7a-211
(1)
|
Ensembl | 914 nt | ||
ncRNA |
lmo7a-213
(1)
|
Ensembl | 962 nt |
Interactions and Pathways
No data available
Plasmids
No data available