Transcript

lmo7a-208

ID

ZDB-TSCRIPT-090929-15389

Name

lmo7a-208 Nomenclature History

Previous Names

lmo7a-012

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

lmo7a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139614 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000139614.2|gene_biotype:protein_coding|ENSDARG00000004930.11 transcript_biotype:retained_intron cdna chromosome:GRCz11:9:21899611:21903109:-1
CTAATTTGTCTTCTATTAATGTTGTTCAATCATGTCCGTG
TGAACATCTGCTTGTCTGTGCTGATTCTGCTGTTGGCCAC
ACAGTAAGGTGGACTCCTTTTGCTATACCAATGTTTACCC
TGAATTATCCTACTCACACAGGTAATCAGACTGTTTGCAC
TAACATTTGCACTTAACAAAGCAATGCTTTCAGGTTTGGG
GCTCCTGCAGTAAAGAAACTTACATTAAGCTCTTTTCATC
TGCAGGTCCATTTCCAAATCTACCCCAGAACTTGATGAAG
TTGCAAAAACAGATATTAAAGGTGTCTACGGCAGACACAG
GGGTTTGGCAGGATGGCTGCTGGAGGAGGAACTGAGGCGA
AAGAAAAACCCTCAAATGCAGAGAAAGCAGGCAGCAAGTG
AGCTAGAGCTCGAGAGGAGAAGCATTCTTAATGCCATGAA
ATACCGAAACCCAGAAAGAGCAAGCGGTGGTCTGAGTGAG
GTCAACAGGGACTATCAGAAAGAGCCTCTAACTCAGTCTG
AGCTGGAGAGGCAGCAGATCCTTCAGGAAATGAGGAAGAA
AACTTCCCTGAACACAGACAACAGCTGGATTCGCCAGAGC
ACTTCTAGTGTCCCTGCCAAAGAGCCAATCGATCTACCCA
TAAGAAGAGGTGAGTCTCTTGACAACCTTGATGAGCCTCG
TTCCTCCTGGAGATCATCATGGAGCACGTCAAACAGCACC
TCGTCCATACCAGACTATAGCCGGCCACATTCAGCCCTCT
CTGGCTCCACATTGCAGCCGGCTGGACGTCCAGGCTCTGC
CACTATGCAGGCATCTCAATCCATGAGCTCTCTCAGGCAG
TCCACTTCCACACCTGCAAACCCACCAGAGCCTCGAGCTC
CACAGAGAAACAGGT

OTTDART00000034653 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000034653|OTTDARG00000026179|ZDB-GENE-030219-74 lmo7a|no_translation DKEY-57A22.10-012 LG_ CR536604.6 Danio rerio protein_coding NOVEL, 895 bp
CTAATTTGTCTTCTATTAATGTTGTTCAATCATGTCCGTG
TGAACATCTGCTTGTCTGTGCTGATTCTGCTGTTGGCCAC
ACAGTAAGGTGGACTCCTTTTGCTATACCAATGTTTACCC
TGAATTATCCTACTCACACAGGTAATCAGACTGTTTGCAC
TAACATTTGCACTTAACAAAGCAATGCTTTCAGGTTTGGG
GCTCCTGCAGTAAAGAAACTTACATTAAGCTCTTTTCATC
TGCAGGTCCATTTCCAAATCTACCCCAGAACTTGATGAAG
TTGCAAAAACAGATATTAAAGGTGTCTACGGCAGACACAG
GGGTTTGGCAGGATGGCTGCTGGAGGAGGAACTGAGGCGA
AAGAAAAACCCTCAAATGCAGAGAAAGCAGGCAGCAAGTG
AGCTAGAGCTCGAGAGGAGAAGCATTCTTAATGCCATGAA
ATACCGAAACCCAGAAAGAGCAAGCGGTGGTCTGAGTGAG
GTCAACAGGGACTATCAGAAAGAGCCTCTAACTCAGTCTG
AGCTGGAGAGGCAGCAGATCCTTCAGGAAATGAGGAAGAA
AACTTCCCTGAACACAGACAACAGCTGGATTCGCCAGAGC
ACTTCTAGTGTCCCTGCCAAAGAGCCAATCGATCTACCCA
TAAGAAGAGGTGAGTCTCTTGACAACCTTGATGAGCCTCG
TTCCTCCTGGAGATCATCATGGAGCACGTCAAACAGCACC
TCGTCCATACCAGACTATAGCCGGCCACATTCAGCCCTCT
CTGGCTCCACATTGCAGCCGGCTGGACGTCCAGGCTCTGC
CACTATGCAGGCATCTCAATCCATGAGCTCTCTCAGGCAG
TCCACTTCCACACCTGCAAACCCACCAGAGCCTCGAGCTC
CACAGAGAAACAGGT

Related Transcripts

Transcripts related to lmo7a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lmo7a-203 (1) Ensembl	Ensembl	625 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-201 (1) Ensembl	Ensembl	6,323 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-202 (1) Ensembl	Ensembl	812 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-204 (1) Ensembl	Ensembl	1,052 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-210 (1) Ensembl	Ensembl	663 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-212 (1) Ensembl	Ensembl	754 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-008 (1) Ensembl	Ensembl	853 nt	(2 sequences)
ncRNA	lmo7a-206 (1) Ensembl	Ensembl	824 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-207 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-208	Ensembl	895 nt
ncRNA	lmo7a-209 (1) Ensembl	Ensembl	853 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-211 (1) Ensembl	Ensembl	914 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-213 (1) Ensembl	Ensembl	962 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations