Gene

tfdp2

ID

ZDB-GENE-030219-104

Name

transcription factor Dp-2

Symbol

tfdp2 Nomenclature History

Previous Names

id:ibd2511 (1)
wu:fb94f09 (1)
zgc:110490

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have several functions, including DNA-binding transcription factor activity; transcription coregulator activity; and transcription factor binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in brain and spinal cord. Orthologous to human TFDP2 (transcription factor Dp-2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7154724 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tfdp2 Human Ortholog

No data available

Associated With tfdp2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003316	E2F/DP family, winged-helix DNA-binding domain
Domain	IPR014889	Transcription factor DP, C-terminal
Family	IPR015648	Transcription factor DP
Homologous_superfamily	IPR036388	Winged helix-like DNA-binding domain superfamily
Homologous_superfamily	IPR036390	Winged helix DNA-binding domain superfamily
Homologous_superfamily	IPR037241	E2F-DP heterodimerization region
Homologous_superfamily	IPR038168	Transcription factor DP, C-terminal domain superfamily

Domain Details Per Protein

Protein	Length	E2F/DP family, winged-helix DNA-binding domain	E2F-DP heterodimerization region	Transcription factor DP	Transcription factor DP, C-terminal	Transcription factor DP, C-terminal domain superfamily	Winged helix DNA-binding domain superfamily	Winged helix-like DNA-binding domain superfamily
UniProtKB:Q6TNQ1 InterPro	409

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tfdp2-201 (1) Ensembl	Ensembl	1,056 nt	Select Tool
mRNA	tfdp2-202 (1) Ensembl	Ensembl	2,096 nt	Select Tool ZFIN BLAST
mRNA	tfdp2-204 (1) Ensembl	Ensembl	2,100 nt	Select Tool
mRNA	tfdp2-209 (1) Ensembl	Ensembl	1,460 nt	Select Tool ZFIN BLAST
ncRNA	tfdp2-002 (1) Ensembl	Ensembl	577 nt	Select Tool
ncRNA	tfdp2-003 (1) Ensembl	Ensembl	765 nt	Select Tool
ncRNA	tfdp2-004 (1) Ensembl	Ensembl	1,182 nt	Select Tool
ncRNA	tfdp2-005 (1) Ensembl	Ensembl	1,225 nt	Select Tool
ncRNA	tfdp2-007 (1) Ensembl	Ensembl	776 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations