ZFIN ID: ZDB-GENE-030131-8517
Gene Name: zgc:162941
Gene Symbol: zgc:162941
Sequence Ontology ID : SO:0000704

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Previous Names: fb14a09, lyg2 (1), wu:fb14a09

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have lysozyme activity; predicted to be involved in cell wall macromolecule catabolic process and peptidoglycan catabolic process; orthologous to several human genes including LYG2  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: Fig. 3 from Gomez et al., 2012
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:162941 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:162941 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell wall macromolecule catabolic process (more)
Molecular Function hydrolase activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002152 (1)
  • InterPro:IPR023346 (1)
  • EC:3.2.1.17 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:162941-201 (1) 847
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:162941 No data available
    MARKER RELATIONSHIPS
    zgc:162941Contained in: [BAC] CH211-42H24 (1) (order this)
    zgc:162941Encodes: [EST] fb14a09
    [cDNA] MGC:162941 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082820 (1) 877bp
    Genomic GenBank:CR774199 (1) 162722bp
    Select Tool
    Polypeptide UniProtKB:A3KP47 (1) 185aa
    Sequence Clusters UniGene:132255 (1)
    Sequence Information (all 11)
    OTHER zgc:162941 GENE PAGES
  • Alliance (1)
  • Gene:559821 (1)
  • VEGA:OTTDARG00000028357 (1)
  • Ensembl(GRCz11):ENSDARG00000071701 (1)
  • ORTHOLOGY for zgc:162941 (Chr: 14)
    CITATIONS (14)