ZFIN ID: ZDB-GENE-030131-7349
Gene Name: suppressor of cytokine signaling 3a
Gene Symbol: socs3a
Sequence Ontology ID : SO:0000704

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Previous Names: socs3, fj09e12, wu:fj09e12, zgc:56537 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 12 figures from 9 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56537]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hg36 Point Mutation Exon 2 Unknown ENU
ihb31 Indel Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • ihb35 Small Deletion Unknown Unknown TALEN
    Targeting reagents:
    PHENOTYPE
    Data: Fig. 3 from Liang et al., 2012
    Observed in:
    DISEASE ASSOCIATED WITH socs3a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH socs3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regeneration (more)
    Cellular Component cytoplasm (more)
    Molecular Function protein kinase inhibitor activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000980 (1)
  • InterPro:IPR001496 (1)
  • InterPro:IPR028414 (1)
  • InterPro:IPR035863 (1)
  • InterPro:IPR036036 (1)
  • InterPro:IPR036860 (1)
  • PROSITE:PS50001 (1)
  • PROSITE:PS50225 (1)
  • Pfam:PF00017 (1)
  • Pfam:PF07525 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA socs3a-001 (1) 1935
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM socs3a No data available
    MARKER RELATIONSHIPS
    socs3aContained in: [BAC] CH211-255A4 (order this)
    socs3aEncodes: [EST] fj09e12
    [cDNA] MGC:56537 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199950 (1) 1951bp
    Genomic GenBank:AL953847 (1) 144933bp
    Select Tool
    Polypeptide UniProtKB:L0N8K9 (1) 207aa
    Sequence Clusters UniGene:6431 (1)
    Sequence Information (all 18)
    OTHER socs3a GENE PAGES
  • Alliance (1)
  • Gene:335409 (1)
  • VEGA:OTTDARG00000021880 (1)
  • Ensembl(GRCz11):ENSDARG00000025428 (2)
  • ORTHOLOGY for socs3a (Chr: 3)
    CITATIONS (65)