Gene

stau1

ID

ZDB-GENE-030131-6372

Name

staufen double-stranded RNA binding protein 1

Symbol

stau1 Nomenclature History

Previous Names

fi67e05
wu:fi67e05
zgc:77271

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Exhibits RNA binding activity. Involved in germ cell development. Is expressed in brain; gonad; musculature system; and neural tube. Orthologous to human STAU1 (staufen double-stranded RNA binding protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:77271 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With stau1 Human Ortholog

No data available

Associated With stau1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR014720	Double-stranded RNA-binding domain
Domain	IPR032478	Staufen, C-terminal
Domain	IPR044475	Staufen 1, third double-stranded RNA binding domain
Family	IPR051740	Double-stranded RNA-binding domain-containing protein

Domain Details Per Protein

Protein	Length	Double-stranded RNA-binding domain	Double-stranded RNA-binding domain-containing protein	Staufen 1, third double-stranded RNA binding domain	Staufen, C-terminal
UniProtKB:F1Q5V4 InterPro	690
UniProtKB:A0A8M1PJS2 InterPro	702

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	stau1-201 (1) Ensembl	Ensembl	3,092 nt	Select Tool ZFIN BLAST
mRNA	stau1-202 (1) Ensembl	Ensembl	3,066 nt	Select Tool
mRNA	stau1-203 (1) Ensembl	Ensembl	840 nt	Select Tool
mRNA	stau1-204 (1) Ensembl	Ensembl	3,131 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
AB2-stau1	polyclonal	stau1		Mouse	IHC		1
AB1-stau1	polyclonal	stau1		Guinea pig	IHC OTHR		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations