Gene

abi3bpb

ID

ZDB-GENE-030131-6041

Name

ABI family, member 3 (NESH) binding protein b

Symbol

abi3bpb Nomenclature History

Previous Names

abi3bp
wu:fi31h06
zgc:55418

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to be involved in extracellular matrix organization and positive regulation of cell-substrate adhesion. Predicted to be active in collagen-containing extracellular matrix. Orthologous to human ABI3BP (ABI family member 3 binding protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With abi3bpb Human Ortholog

No data available

Associated With abi3bpb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003961	Fibronectin type III
Domain	IPR049109	Target of Nesh-SH3/FNDC1, C-terminal domain
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M3AMF4	InterPro	637
UniProtKB:A0A8M9PRP0	InterPro	782
UniProtKB:A0A8M3AN69	InterPro	613
UniProtKB:Q7ZW12	InterPro	785
UniProtKB:A0A2R8RYU1	InterPro	807
UniProtKB:A0A8M3AUV1	InterPro	691
UniProtKB:A0A8M9P472	InterPro	659
UniProtKB:A0A8M3B5Q1	InterPro	635
UniProtKB:A0A8M2B8M2	InterPro	740
UniProtKB:A0A8M3AN66	InterPro	729
UniProtKB:A0A8M3AXV1	InterPro	715
UniProtKB:A0AB32T8V7	InterPro	772
UniProtKB:A0AB32TBQ4	InterPro	716
UniProtKB:A0AB32TEE7	InterPro	694

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	abi3bpb-201 (1) Ensembl	Ensembl	3,641 nt	Select Tool ZFIN BLAST
mRNA	abi3bpb-203 (1) Ensembl	Ensembl	4,075 nt	Select Tool ZFIN BLAST
ncRNA	abi3bpb-002 (1) Ensembl	Ensembl	449 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations