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ZIRC
ZFIN ID: ZDB-GENE-030131-5926
Gene Name: si:dkey-177p2.6
Gene Symbol: si:dkey-177p2.6    Nomenclature History

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Previous Names: fi25f07, wu:fc26b09, wu:fi25f07, zgc:153052

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description:
Genome Resources: Alliance (1),  Gene:568712 (1),  Ensembl(GRCz11):ENSDARG00000042322 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu1109]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021499Tg Transgenic Insertion Unknown Unknown DNA
sa5952 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:dkey-177p2.6 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:dkey-177p2.6 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cellular_component (more)
Molecular Function molecular_function (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009263 (1)
  • PROSITE:PS51053 (1)
  • Pfam:PF06031 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:dkey-177p2.6-201 (1)    Ensembl 4764
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-177p2.6 No data available
    MARKER RELATIONSHIPS
    si:dkey-177p2.6 Contained in: [BAC] DKEY-177P2 (1) (order this)
    si:dkey-177p2.6 Encodes: [EST] eu1109 (1), fc26b09, fi25f07
    [cDNA] MGC:153052 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001075116 (1) 1772 bp
    Genomic GenBank:BX248515 (1) 212105 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QFG5 (1) 285 aa
    Sequence Clusters UniGene:46856 (1)
    Sequence Information (all 18)
    ORTHOLOGY for si:dkey-177p2.6 ( Chr: 20 )
    CITATIONS (23)