Gene

bmb

ID

ZDB-GENE-030131-5577

Name

brambleberry

Symbol

bmb Nomenclature History

Previous Names

fi04f09
wu:fi04f09

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Involved in pronuclear fusion. Acts upstream of or within karyomere membrane fusion. Predicted to be located in nuclear membrane. Is expressed in several structures, including blastomere.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from Abrams et al., 2012

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 4 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With bmb Human Ortholog

No data available

Associated With bmb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR040346	GEX1/Brambleberry

Domain Details Per Protein

Protein	Additional Resources	Length	GEX1/Brambleberry
UniProtKB:I6V1W0	InterPro	612

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	bmb-201 (1) Ensembl	Ensembl	2,541 nt	Select Tool ZFIN BLAST
mRNA	bmb-203 (1) Ensembl	Ensembl	772 nt	Select Tool ZFIN BLAST
ncRNA	bmb-003 (1) Ensembl	Ensembl	861 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-bmb		bmb		Rat	IHC		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations