ZFIN ID: ZDB-GENE-030131-5174
Gene Name: GABA(A) receptor-associated protein a
Gene Symbol: gabarapa
Sequence Ontology ID : SO:0000704

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Previous Names: gabarap, mg:bb02b03

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GABA receptor binding activity; involved in brain development; predicted to localize to the autophagosome membrane and cytosol; orthologous to several human genes including GABARAP  ...
GENE EXPRESSION
All Expression Data: 7 figures from 5 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024881Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents:
PHENOTYPE
Data: Fig. 4 from Komoike et al., 2010
Observed in:
DISEASE ASSOCIATED WITH gabarapa HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH gabarapa VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process brain development (more)
Cellular Component autophagosome membrane (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004241 (1)
  • InterPro:IPR029071 (1)
  • Pfam:PF02991 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gabarapa-001 (1) 1315
    ncRNA gabarapa-002 (1) 706
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gabarapa
    MARKER RELATIONSHIPS
    gabarapaContained in: [BAC] CH211-114C12 (1) (order this)
    gabarapaEncodes: [EST] bb02b03, IMAGE:6997688
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013260 (1)
    Genomic GenBank:AL928875 (1) 158038bp
    Select Tool
    Polypeptide UniProtKB:Q6NZZ7 (1) 163aa
    Sequence Clusters UniGene:12845 (1)
    Sequence Information (all 16)
    OTHER gabarapa GENE PAGES
  • Alliance (1)
  • Gene:326974 (1)
  • VEGA:OTTDARG00000016237 (1)
  • ORTHOLOGY for gabarapa (Chr: 5)
    CITATIONS (26)