Gene

rpl5a

ID
ZDB-GENE-030131-5161
Name
ribosomal protein L5a
Symbol
rpl5a Nomenclature History
Previous Names
  • rpl5l
  • mg:cb01f08
  • zgc:77176
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to enable 5S rRNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within chordate embryonic development. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in intestine; liver; and pancreas. Used to study Diamond-Blackfan anemia. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 6; T-cell acute lymphoblastic leukemia; and glioblastoma. Orthologous to human RPL5 (ribosomal protein L5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rpl5a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Diamond-Blackfan anemia 6 Alliance Diamond-Blackfan anemia 6 612561
Associated With rpl5a Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR025607 Large ribosomal subunit protein uL18, C-terminal, eukaryotes
Family IPR005485 Large ribosomal subunit protein uL18 eukaryotic/archaeal
Domain Details Per Protein
Protein Length Large ribosomal subunit protein uL18, C-terminal, eukaryotes Large ribosomal subunit protein uL18 eukaryotic/archaeal
UniProtKB:Q7ZUI0 297
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rpl5a-201 (1) Ensembl 1,039 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations